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  5. Solyc08g080820.1.1

Solyc08g080820.1.1


Description : no hits & (original description: none)


Gene families : OG0006163 (Archaeplastida) Phylogenetic Tree(s): OG0006163_tree ,
OG_05_0004198 (LandPlants) Phylogenetic Tree(s): OG_05_0004198_tree ,
OG_06_0002697 (SeedPlants) Phylogenetic Tree(s): OG_06_0002697_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g080820.1.1
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
Solyc07g056325.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc07g056610.2.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc07g056704.1.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc07g056706.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc07g056708.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc08g080810.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009607 response to biotic stimulus IEP Neighborhood
BP GO:0009620 response to fungus IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0043207 response to external biotic stimulus IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0050832 defense response to fungus IEP Neighborhood
BP GO:0051704 multi-organism process IEP Neighborhood
BP GO:0051707 response to other organism IEP Neighborhood
BP GO:0098542 defense response to other organism IEP Neighborhood
InterPro domains Description Start Stop
IPR025521 Neprosin_propep 50 135
IPR004314 Neprosin 189 403
No external refs found!