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  5. Solyc09g066120.4.1

Solyc09g066120.4.1


Description : Flowering locus K homology domain OS=Arabidopsis thaliana (sp|q9sr13|flk_arath : 365.0)


Gene families : OG0001697 (Archaeplastida) Phylogenetic Tree(s): OG0001697_tree ,
OG_05_0001748 (LandPlants) Phylogenetic Tree(s): OG_05_0001748_tree ,
OG_06_0003559 (SeedPlants) Phylogenetic Tree(s): OG_06_0003559_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g066120.4.1
Cluster HCCA: Cluster_247

Target Alias Description ECC score Gene Family Method Actions
AT3G04610 FLK RNA-binding KH domain-containing protein 0.03 Archaeplastida
GSVIVT01029319001 No alias RNA-binding KH domain-containing protein PEPPER... 0.03 Archaeplastida
LOC_Os10g41440.1 No alias RNA-binding KH domain-containing protein PEPPER... 0.03 Archaeplastida
MA_10428218g0010 No alias Flowering locus K homology domain OS=Arabidopsis... 0.04 Archaeplastida
MA_10431753g0010 No alias Flowering locus K homology domain OS=Arabidopsis... 0.03 Archaeplastida
MA_10433906g0010 No alias Flowering locus K homology domain OS=Arabidopsis... 0.03 Archaeplastida
Mp7g17380.1 No alias Flowering locus K homology domain OS=Arabidopsis... 0.02 Archaeplastida
Pp3c14_5750V3.1 No alias RNA-binding KH domain-containing protein 0.02 Archaeplastida
Solyc06g084000.4.1 No alias Flowering locus K homology domain OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e003145_P004 No alias Flowering locus K homology domain OS=Arabidopsis... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
CC GO:0031011 Ino80 complex IEP Neighborhood
CC GO:0033202 DNA helicase complex IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
CC GO:0070603 SWI/SNF superfamily-type complex IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
CC GO:0097346 INO80-type complex IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
CC GO:1904949 ATPase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 188 256
IPR004088 KH_dom_type_1 373 436
IPR004088 KH_dom_type_1 98 150
No external refs found!