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  5. Solyc09g074470.3.1

Solyc09g074470.3.1


Description : actin-binding protein (NET3). actin-binding protein (NET3) of ER-cytoskeleton-plasmamembrane interface


Gene families : OG0000532 (Archaeplastida) Phylogenetic Tree(s): OG0000532_tree ,
OG_05_0000978 (LandPlants) Phylogenetic Tree(s): OG_05_0000978_tree ,
OG_06_0000672 (SeedPlants) Phylogenetic Tree(s): OG_06_0000672_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g074470.3.1
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00147680 evm_27.TU.AmTr_v1... Cytoskeleton.microfilament network.actin-membrane... 0.08 Archaeplastida
AT3G10880 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.14 Archaeplastida
AT5G05180 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.08 Archaeplastida
GSVIVT01011002001 No alias Cytoskeleton.microfilament network.actin-membrane... 0.11 Archaeplastida
GSVIVT01032654001 No alias Cytoskeleton.microfilament network.actin-membrane... 0.18 Archaeplastida
Gb_31480 No alias actin-binding protein (NET3). actin-binding protein... 0.02 Archaeplastida
MA_10429271g0010 No alias No annotation 0.04 Archaeplastida
MA_8069g0010 No alias actin-binding protein (NET3) of... 0.05 Archaeplastida
Zm00001e010923_P001 No alias actin-binding protein (NET3). actin-binding protein... 0.08 Archaeplastida
Zm00001e031073_P001 No alias actin-binding protein (NET4) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEP Neighborhood
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
BP GO:0007059 chromosome segregation IEP Neighborhood
BP GO:0007062 sister chromatid cohesion IEP Neighborhood
BP GO:0007064 mitotic sister chromatid cohesion IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
CC GO:0031390 Ctf18 RFC-like complex IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0045132 meiotic chromosome segregation IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
CC GO:0098687 chromosomal region IEP Neighborhood
BP GO:0098813 nuclear chromosome segregation IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
BP GO:1903046 meiotic cell cycle process IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood
InterPro domains Description Start Stop
IPR011684 NAB 12 87
No external refs found!