Solyc09g075530.3.1

Description : SYP4-group Qa-type SNARE component

Gene families : OG0003410 (Archaeplastida) Phylogenetic Tree(s): OG0003410_tree ,
OG_05_0004541 (LandPlants) Phylogenetic Tree(s): OG_05_0004541_tree ,
OG_06_0004549 (SeedPlants) Phylogenetic Tree(s): OG_06_0004549_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc09g075530.3.1
Cluster	HCCA: Cluster_229

Target	Alias	Description	ECC score	Gene Family Method	Actions
Cpa\|evm.model.tig00001206.20	No alias	Vesicle trafficking.SNARE target membrane recognition...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
CC	GO:0000228	nuclear chromosome	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003712	transcription coregulator activity	IEP	Neighborhood
CC	GO:0005694	chromosome	IEP	Neighborhood
BP	GO:0006325	chromatin organization	IEP	Neighborhood
BP	GO:0006338	chromatin remodeling	IEP	Neighborhood
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	Neighborhood
BP	GO:0006914	autophagy	IEP	Neighborhood
MF	GO:0008080	N-acetyltransferase activity	IEP	Neighborhood
MF	GO:0016407	acetyltransferase activity	IEP	Neighborhood
MF	GO:0016410	N-acyltransferase activity	IEP	Neighborhood
CC	GO:0016592	mediator complex	IEP	Neighborhood
CC	GO:0044422	organelle part	IEP	Neighborhood
CC	GO:0044428	nuclear part	IEP	Neighborhood
CC	GO:0044446	intracellular organelle part	IEP	Neighborhood
CC	GO:0044451	nucleoplasm part	IEP	Neighborhood
BP	GO:0061919	process utilizing autophagic mechanism	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000727	T_SNARE_dom	259	311

External Links

No external refs found!