1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc09g082620.3.1

Solyc09g082620.3.1


Description : EPF/EPFL precursor polypeptide


Gene families : OG0000526 (Archaeplastida) Phylogenetic Tree(s): OG0000526_tree ,
OG_05_0000287 (LandPlants) Phylogenetic Tree(s): OG_05_0000287_tree ,
OG_06_0001634 (SeedPlants) Phylogenetic Tree(s): OG_06_0001634_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g082620.3.1
Cluster HCCA: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00270870 evm_27.TU.AmTr_v1... Phytohormones.signalling peptides.CRP... 0.06 Archaeplastida
AMTR_s00038p00234600 evm_27.TU.AmTr_v1... Phytohormones.signalling peptides.CRP... 0.07 Archaeplastida
AT2G30370 EPFL6, CHAL allergen-related 0.03 Archaeplastida
AT3G13898 No alias unknown protein; LOCATED IN: endomembrane system; BEST... 0.03 Archaeplastida
AT4G37810 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.08 Archaeplastida
AT5G10310 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 Archaeplastida
GSVIVT01015177001 No alias Phytohormones.signalling peptides.CRP... 0.04 Archaeplastida
GSVIVT01018037001 No alias Phytohormones.signalling peptides.CRP... 0.04 Archaeplastida
Gb_05485 No alias EPF/EPFL precursor polypeptide 0.03 Archaeplastida
Gb_17311 No alias EPF/EPFL precursor polypeptide 0.03 Archaeplastida
Gb_39245 No alias EPF/EPFL precursor polypeptide 0.06 Archaeplastida
LOC_Os01g60900.1 No alias EPF/EPFL precursor polypeptide 0.03 Archaeplastida
LOC_Os03g06610.1 No alias EPF/EPFL precursor polypeptide 0.06 Archaeplastida
LOC_Os03g46930.1 No alias EPF/EPFL precursor polypeptide 0.06 Archaeplastida
LOC_Os07g04020.1 No alias EPF/EPFL precursor polypeptide 0.07 Archaeplastida
LOC_Os08g37890.1 No alias EPF/EPFL precursor polypeptide 0.02 Archaeplastida
MA_105123g0010 No alias EPF/EPFL precursor polypeptide 0.03 Archaeplastida
MA_110556g0010 No alias EPF/EPFL precursor polypeptide 0.04 Archaeplastida
MA_112390g0010 No alias EPF/EPFL precursor polypeptide 0.04 Archaeplastida
MA_184852g0010 No alias EPF/EPFL precursor polypeptide 0.04 Archaeplastida
MA_38686g0020 No alias EPF/EPFL precursor polypeptide 0.04 Archaeplastida
Mp4g23980.1 No alias EPF/EPFL precursor polypeptide 0.04 Archaeplastida
Pp3c1_26030V3.1 No alias allergen-related 0.05 Archaeplastida
Pp3c23_11350V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c24_9860V3.1 No alias allergen-related 0.03 Archaeplastida
Pp3c5_11260V3.1 No alias allergen-related 0.06 Archaeplastida
Solyc11g009040.3.1 No alias No annotation 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!