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Description : Putative E3 ubiquitin-protein ligase RF298 OS=Arabidopsis thaliana (sp|q0wpj7|rf298_arath : 83.2)
Gene families : OG0009299 (Archaeplastida) Phylogenetic Tree(s): OG0009299_tree ,
OG_05_0009169 (LandPlants) Phylogenetic Tree(s): OG_05_0009169_tree ,
OG_06_0003957 (SeedPlants) Phylogenetic Tree(s): OG_06_0003957_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc10g050610.1.1 | |
| Cluster | HCCA: Cluster_462 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Solyc09g074140.3.1 | No alias | Putative E3 ubiquitin-protein ligase RF4 OS=Arabidopsis... | 0.04 | Archaeplastida | |
| Solyc09g074190.2.1 | No alias | Putative E3 ubiquitin-protein ligase RF4 OS=Arabidopsis... | 0.04 | Archaeplastida | |
| Solyc09g074200.3.1 | No alias | Putative E3 ubiquitin-protein ligase RF298... | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | Neighborhood |
| MF | GO:0003712 | transcription coregulator activity | IEP | Neighborhood |
| MF | GO:0004527 | exonuclease activity | IEP | Neighborhood |
| CC | GO:0005576 | extracellular region | IEP | Neighborhood |
| CC | GO:0005618 | cell wall | IEP | Neighborhood |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | Neighborhood |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Neighborhood |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Neighborhood |
| CC | GO:0016592 | mediator complex | IEP | Neighborhood |
| MF | GO:0016762 | xyloglucan:xyloglucosyl transferase activity | IEP | Neighborhood |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Neighborhood |
| CC | GO:0030312 | external encapsulating structure | IEP | Neighborhood |
| MF | GO:0030599 | pectinesterase activity | IEP | Neighborhood |
| BP | GO:0035556 | intracellular signal transduction | IEP | Neighborhood |
| BP | GO:0042545 | cell wall modification | IEP | Neighborhood |
| BP | GO:0044042 | glucan metabolic process | IEP | Neighborhood |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | Neighborhood |
| CC | GO:0044422 | organelle part | IEP | Neighborhood |
| CC | GO:0044428 | nuclear part | IEP | Neighborhood |
| CC | GO:0044446 | intracellular organelle part | IEP | Neighborhood |
| CC | GO:0044451 | nucleoplasm part | IEP | Neighborhood |
| BP | GO:0045229 | external encapsulating structure organization | IEP | Neighborhood |
| CC | GO:0048046 | apoplast | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | Neighborhood |
| BP | GO:0071555 | cell wall organization | IEP | Neighborhood |
| MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |