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  5. Solyc10g078920.3.1

Solyc10g078920.3.1


Description : Thioredoxin-like 3-1, chloroplastic OS=Arabidopsis thaliana (sp|q9fg36|trl31_arath : 155.0)


Gene families : OG0003840 (Archaeplastida) Phylogenetic Tree(s): OG0003840_tree ,
OG_05_0003089 (LandPlants) Phylogenetic Tree(s): OG_05_0003089_tree ,
OG_06_0003476 (SeedPlants) Phylogenetic Tree(s): OG_06_0003476_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g078920.3.1
Cluster HCCA: Cluster_253

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00170520 evm_27.TU.AmTr_v1... Thioredoxin-like 3-1, chloroplastic OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01033478001 No alias Thioredoxin-like 3-1, chloroplastic OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_10427 No alias Thioredoxin-like 3-1, chloroplastic OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os02g53400.1 No alias Thioredoxin-like 3-1, chloroplastic OS=Oryza sativa... 0.09 Archaeplastida
Smo122603 No alias Thioredoxin-like 3-2, chloroplastic OS=Arabidopsis thaliana 0.03 Archaeplastida
Zm00001e016008_P002 No alias Thioredoxin-like 3-1, chloroplastic OS=Oryza sativa... 0.02 Archaeplastida
Zm00001e023777_P001 No alias Thioredoxin-like 3-1, chloroplastic OS=Oryza sativa... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003989 acetyl-CoA carboxylase activity IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
BP GO:0006772 thiamine metabolic process IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
BP GO:0009228 thiamine biosynthetic process IEP Neighborhood
CC GO:0009317 acetyl-CoA carboxylase complex IEP Neighborhood
MF GO:0016421 CoA carboxylase activity IEP Neighborhood
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0042723 thiamine-containing compound metabolic process IEP Neighborhood
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Neighborhood
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 93 141
No external refs found!