Aliases : evm_27.TU.AmTr_v1.0_scaffold00031.70
Description : Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana
Gene families : OG0002304 (Archaeplastida) Phylogenetic Tree(s): OG0002304_tree ,
OG_05_0002049 (LandPlants) Phylogenetic Tree(s): OG_05_0002049_tree ,
OG_06_0002095 (SeedPlants) Phylogenetic Tree(s): OG_06_0002095_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AMTR_s00031p00165100 | |
Cluster | HCCA: Cluster_235 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT4G00830 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.04 | Archaeplastida | |
Cpa|evm.model.tig00020961.48 | No alias | No description available | 0.03 | Archaeplastida | |
GSVIVT01036119001 | No alias | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana | 0.04 | Archaeplastida | |
LOC_Os10g06130.1 | No alias | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... | 0.04 | Archaeplastida | |
LOC_Os11g14430.2 | No alias | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... | 0.03 | Archaeplastida | |
Mp1g12580.1 | No alias | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... | 0.02 | Archaeplastida | |
Pp3c12_1580V3.1 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.02 | Archaeplastida | |
Pp3c17_1210V3.1 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.02 | Archaeplastida | |
Smo169951 | No alias | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
Solyc09g009890.4.1 | No alias | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... | 0.04 | Archaeplastida | |
Solyc10g009220.3.1 | No alias | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... | 0.05 | Archaeplastida | |
Zm00001e021852_P001 | No alias | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... | 0.04 | Archaeplastida | |
Zm00001e039207_P005 | No alias | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
MF | GO:0001882 | nucleoside binding | IEP | Neighborhood |
MF | GO:0001883 | purine nucleoside binding | IEP | Neighborhood |
MF | GO:0003723 | RNA binding | IEP | Neighborhood |
MF | GO:0003924 | GTPase activity | IEP | Neighborhood |
MF | GO:0005524 | ATP binding | IEP | Neighborhood |
MF | GO:0005525 | GTP binding | IEP | Neighborhood |
CC | GO:0005669 | transcription factor TFIID complex | IEP | Neighborhood |
CC | GO:0005730 | nucleolus | IEP | Neighborhood |
BP | GO:0006184 | obsolete GTP catabolic process | IEP | Neighborhood |
BP | GO:0006304 | DNA modification | IEP | Neighborhood |
BP | GO:0006305 | DNA alkylation | IEP | Neighborhood |
BP | GO:0006306 | DNA methylation | IEP | Neighborhood |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0007155 | cell adhesion | IEP | Neighborhood |
MF | GO:0008026 | ATP-dependent helicase activity | IEP | Neighborhood |
MF | GO:0008144 | drug binding | IEP | Neighborhood |
MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
MF | GO:0016462 | pyrophosphatase activity | IEP | Neighborhood |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Neighborhood |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Neighborhood |
MF | GO:0016887 | ATPase activity | IEP | Neighborhood |
MF | GO:0017056 | structural constituent of nuclear pore | IEP | Neighborhood |
MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Neighborhood |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Neighborhood |
BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
BP | GO:0022610 | biological adhesion | IEP | Neighborhood |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
MF | GO:0032549 | ribonucleoside binding | IEP | Neighborhood |
MF | GO:0032550 | purine ribonucleoside binding | IEP | Neighborhood |
MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Neighborhood |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
MF | GO:0042623 | ATPase activity, coupled | IEP | Neighborhood |
MF | GO:0043167 | ion binding | IEP | Neighborhood |
MF | GO:0043168 | anion binding | IEP | Neighborhood |
BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
CC | GO:0044428 | nuclear part | IEP | Neighborhood |
BP | GO:0044728 | DNA methylation or demethylation | IEP | Neighborhood |
CC | GO:0044798 | nuclear transcription factor complex | IEP | Neighborhood |
MF | GO:0070035 | purine NTP-dependent helicase activity | IEP | Neighborhood |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
CC | GO:0090575 | RNA polymerase II transcription factor complex | IEP | Neighborhood |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
No external refs found! |