Solyc11g006500.2.1


Description : VPS60 associated protein of ESCRT-III complex


Gene families : OG0001852 (Archaeplastida) Phylogenetic Tree(s): OG0001852_tree ,
OG_05_0003381 (LandPlants) Phylogenetic Tree(s): OG_05_0003381_tree ,
OG_06_0003741 (SeedPlants) Phylogenetic Tree(s): OG_06_0003741_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g006500.2.1
Cluster HCCA: Cluster_235

Target Alias Description ECC score Gene Family Method Actions
AT3G10640 VPS60.1 SNF7 family protein 0.04 Archaeplastida
Cpa|evm.model.tig00021432.8 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 Archaeplastida
Cre13.g577950 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 Archaeplastida
Zm00001e029711_P001 No alias VPS60 associated protein of ESCRT-III complex 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004143 diacylglycerol kinase activity IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
BP GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
InterPro domains Description Start Stop
IPR005024 Snf7_fam 12 207
No external refs found!