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  5. Solyc11g010710.2.1

Solyc11g010710.2.1


Description : transcription factor (AP2)


Gene families : OG0000068 (Archaeplastida) Phylogenetic Tree(s): OG0000068_tree ,
OG_05_0000090 (LandPlants) Phylogenetic Tree(s): OG_05_0000090_tree ,
OG_06_0000054 (SeedPlants) Phylogenetic Tree(s): OG_06_0000054_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g010710.2.1
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AT1G72570 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT2G28550 RAP2.7, TOE1 related to AP2.7 0.03 Archaeplastida
AT3G20840 PLT1 Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT4G37750 DRG, CKC, CKC1, ANT Integrase-type DNA-binding superfamily protein 0.05 Archaeplastida
AT5G67180 TOE3 target of early activation tagged (EAT) 3 0.04 Archaeplastida
Cre08.g385350 No alias No description available 0.03 Archaeplastida
Cre10.g441300 No alias AP2-like ethylene-responsive transcription factor ANT... 0.03 Archaeplastida
Cre19.g750947 No alias No description available 0.02 Archaeplastida
GSVIVT01004382001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01009293001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01009294001 No alias AP2-like ethylene-responsive transcription factor ANT... 0.04 Archaeplastida
GSVIVT01016764001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01025100001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01029219001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 Archaeplastida
Gb_18560 No alias transcription factor (AP2) 0.02 Archaeplastida
Gb_29561 No alias transcription factor (AP2) 0.02 Archaeplastida
LOC_Os03g12950.1 No alias no description available(sp|q84z02|crl5_orysj : 102.0) 0.08 Archaeplastida
LOC_Os03g19900.1 No alias transcription factor (AP2) 0.03 Archaeplastida
LOC_Os03g56050.1 No alias transcription factor (AP2) 0.05 Archaeplastida
LOC_Os06g43220.1 No alias transcription factor (AP2) 0.03 Archaeplastida
LOC_Os07g03250.1 No alias transcription factor (AP2) 0.05 Archaeplastida
LOC_Os07g13170.2 No alias transcription factor (AP2) 0.05 Archaeplastida
LOC_Os08g34360.1 No alias transcription factor (AP2) 0.02 Archaeplastida
MA_113625g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_121578g0010 No alias transcription factor (AP2) 0.03 Archaeplastida
MA_196219g0010 No alias transcription factor (AP2) 0.02 Archaeplastida
MA_86195g0010 No alias transcription factor (AP2) 0.02 Archaeplastida
MA_98095g0010 No alias transcription factor (AP2) 0.04 Archaeplastida
Mp8g11450.1 No alias transcription factor (AP2) 0.03 Archaeplastida
Pp3c15_4400V3.1 No alias target of early activation tagged (EAT) 2 0.04 Archaeplastida
Pp3c23_13360V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Smo98831 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
Solyc05g051380.4.1 No alias transcription factor (AP2) 0.05 Archaeplastida
Zm00001e005817_P003 No alias transcription factor (AP2) 0.08 Archaeplastida
Zm00001e006752_P001 No alias transcription factor (AP2) 0.03 Archaeplastida
Zm00001e032754_P003 No alias transcription factor (AP2) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003713 transcription coactivator activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 258 316
IPR001471 AP2/ERF_dom 360 410
No external refs found!