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  5. Solyc11g018500.3.1

Solyc11g018500.3.1


Description : beta-galactosidase (BGAL)


Gene families : OG0000133 (Archaeplastida) Phylogenetic Tree(s): OG0000133_tree ,
OG_05_0009410 (LandPlants) Phylogenetic Tree(s): OG_05_0009410_tree ,
OG_06_0006604 (SeedPlants) Phylogenetic Tree(s): OG_06_0006604_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g018500.3.1
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00246870 evm_27.TU.AmTr_v1... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.04 Archaeplastida
GSVIVT01024031001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 Archaeplastida
LOC_Os01g39830.1 No alias beta-galactosidase (BGAL) 0.03 Archaeplastida
LOC_Os02g12730.1 No alias beta-galactosidase (BGAL) 0.02 Archaeplastida
MA_10071760g0010 No alias Beta-galactosidase 8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10430979g0010 No alias Beta-galactosidase 8 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_10436863g0010 No alias Beta-galactosidase 3 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
MA_11388g0010 No alias Beta-galactosidase 3 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_168609g0010 No alias beta-galactosidase (BGAL) 0.05 Archaeplastida
MA_65469g0020 No alias beta-galactosidase (BGAL) 0.02 Archaeplastida
Pp3c9_9350V3.1 No alias beta galactosidase 9 0.04 Archaeplastida
Smo269483 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 Archaeplastida
Zm00001e019098_P002 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e019099_P001 No alias beta-galactosidase (BGAL) 0.03 Archaeplastida
Zm00001e019757_P001 No alias beta-galactosidase (BGAL) 0.03 Archaeplastida
Zm00001e024944_P002 No alias beta-galactosidase (BGAL) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Neighborhood
InterPro domains Description Start Stop
IPR025300 BetaGal_jelly_roll_dom 586 669
IPR031330 Gly_Hdrlase_35_cat 21 328
No external refs found!