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Description : 30S ribosomal protein S4, chloroplastic OS=Nicotiana tomentosiformis (sp|q33c33|rr4_nicto : 91.7)
Gene families : OG0003680 (Archaeplastida) Phylogenetic Tree(s): OG0003680_tree ,
OG_05_0003482 (LandPlants) Phylogenetic Tree(s): OG_05_0003482_tree ,
OG_06_0002285 (SeedPlants) Phylogenetic Tree(s): OG_06_0002285_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc11g022620.1.1 | |
| Cluster | HCCA: Cluster_67 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| LOC_Os04g16738.1 | No alias | component psRPS4 of small ribosomal subunit proteome | 0.03 | Archaeplastida | |
| LOC_Os04g16764.1 | No alias | component psRPS4 of small ribosomal subunit proteome | 0.03 | Archaeplastida | |
| LOC_Os10g38214.1 | No alias | component psRPS4 of small ribosomal subunit proteome | 0.03 | Archaeplastida | |
| Solyc09g015310.3.1 | No alias | component psRPS4 of small ribosomal subunit proteome | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005047 | signal recognition particle binding | IEP | Neighborhood |
| MF | GO:0005048 | signal sequence binding | IEP | Neighborhood |
| CC | GO:0005786 | signal recognition particle, endoplasmic reticulum targeting | IEP | Neighborhood |
| BP | GO:0006605 | protein targeting | IEP | Neighborhood |
| BP | GO:0006612 | protein targeting to membrane | IEP | Neighborhood |
| BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | Neighborhood |
| BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | Neighborhood |
| BP | GO:0007010 | cytoskeleton organization | IEP | Neighborhood |
| MF | GO:0008312 | 7S RNA binding | IEP | Neighborhood |
| BP | GO:0009057 | macromolecule catabolic process | IEP | Neighborhood |
| MF | GO:0016624 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor | IEP | Neighborhood |
| MF | GO:0030942 | endoplasmic reticulum signal peptide binding | IEP | Neighborhood |
| MF | GO:0033218 | amide binding | IEP | Neighborhood |
| BP | GO:0033365 | protein localization to organelle | IEP | Neighborhood |
| MF | GO:0042277 | peptide binding | IEP | Neighborhood |
| MF | GO:0043021 | ribonucleoprotein complex binding | IEP | Neighborhood |
| BP | GO:0045047 | protein targeting to ER | IEP | Neighborhood |
| CC | GO:0048500 | signal recognition particle | IEP | Neighborhood |
| BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | Neighborhood |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | Neighborhood |
| BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | Neighborhood |
| BP | GO:0072657 | protein localization to membrane | IEP | Neighborhood |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |