Description : Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana (sp|q94hw2|polr1_arath : 191.0)
Gene families : OG0000375 (Archaeplastida) Phylogenetic Tree(s): OG0000375_tree ,
OG_05_0000187 (LandPlants) Phylogenetic Tree(s): OG_05_0000187_tree ,
OG_06_0000080 (SeedPlants) Phylogenetic Tree(s): OG_06_0000080_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc11g032025.1.1 | |
Cluster | HCCA: Cluster_48 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Solyc01g010175.1.1 | No alias | no hits & (original description: none) | 0.05 | Archaeplastida | |
Solyc02g062565.1.1 | No alias | No annotation | 0.04 | Archaeplastida | |
Solyc03g044937.1.1 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.04 | Archaeplastida | |
Solyc03g078355.1.1 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.04 | Archaeplastida | |
Solyc03g080117.1.1 | No alias | no hits & (original description: none) | 0.1 | Archaeplastida | |
Solyc04g011915.1.1 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.06 | Archaeplastida | |
Solyc05g010755.1.1 | No alias | no hits & (original description: none) | 0.05 | Archaeplastida | |
Solyc05g048755.1.1 | No alias | no hits & (original description: none) | 0.07 | Archaeplastida | |
Solyc06g005525.1.1 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
Solyc06g009975.1.1 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
Solyc06g031714.1.1 | No alias | No annotation | 0.06 | Archaeplastida | |
Solyc08g065675.1.1 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.05 | Archaeplastida | |
Solyc08g068145.1.1 | No alias | no hits & (original description: none) | 0.05 | Archaeplastida | |
Solyc09g011695.1.1 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.05 | Archaeplastida | |
Solyc09g031513.1.1 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
Solyc09g056393.1.1 | No alias | Retrovirus-related Pol polyprotein from transposon RE2... | 0.06 | Archaeplastida | |
Solyc09g065525.1.1 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.1 | Archaeplastida | |
Solyc09g150123.1.1 | No alias | No annotation | 0.08 | Archaeplastida | |
Solyc10g039387.1.1 | No alias | no hits & (original description: none) | 0.15 | Archaeplastida | |
Solyc10g044988.1.1 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.1 | Archaeplastida | |
Solyc11g010245.1.1 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.04 | Archaeplastida | |
Solyc12g019235.1.1 | No alias | No annotation | 0.09 | Archaeplastida | |
Solyc12g019917.1.1 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.06 | Archaeplastida | |
Solyc12g044958.1.1 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003712 | transcription coregulator activity | IEP | Neighborhood |
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Neighborhood |
CC | GO:0016592 | mediator complex | IEP | Neighborhood |
CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
CC | GO:0044424 | intracellular part | IEP | Neighborhood |
CC | GO:0044428 | nuclear part | IEP | Neighborhood |
CC | GO:0044451 | nucleoplasm part | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR013103 | RVT_2 | 2 | 70 |
No external refs found! |