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  5. Solyc12g007150.3.1

Solyc12g007150.3.1


Description : PRONE-type RopGEF guanine nucleotide exchange factor


Gene families : OG0000251 (Archaeplastida) Phylogenetic Tree(s): OG0000251_tree ,
OG_05_0001518 (LandPlants) Phylogenetic Tree(s): OG_05_0001518_tree ,
OG_06_0000896 (SeedPlants) Phylogenetic Tree(s): OG_06_0000896_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g007150.3.1
Cluster HCCA: Cluster_238

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00064220 evm_27.TU.AmTr_v1... Multi-process regulation.Rop GTPase regulatory... 0.02 Archaeplastida
AT1G52240 ATROPGEF11,... RHO guanyl-nucleotide exchange factor 11 0.06 Archaeplastida
AT1G79860 ROPGEF12, MEE64,... RHO guanyl-nucleotide exchange factor 12 0.03 Archaeplastida
AT3G16130 PIRF2, ROPGEF13,... RHO guanyl-nucleotide exchange factor 13 0.05 Archaeplastida
AT3G24620 ROPGEF8, ATROPGEF8 RHO guanyl-nucleotide exchange factor 8 0.03 Archaeplastida
AT4G13240 ATROPGEF9, ROPGEF9 RHO guanyl-nucleotide exchange factor 9 0.02 Archaeplastida
GSVIVT01015369001 No alias Multi-process regulation.Rop GTPase regulatory... 0.04 Archaeplastida
GSVIVT01017070001 No alias Multi-process regulation.Rop GTPase regulatory... 0.04 Archaeplastida
LOC_Os01g48410.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.02 Archaeplastida
LOC_Os01g55520.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.04 Archaeplastida
LOC_Os05g48640.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.04 Archaeplastida
LOC_Os07g29780.2 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.03 Archaeplastida
Solyc03g120650.4.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.03 Archaeplastida
Zm00001e020182_P002 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.03 Archaeplastida
Zm00001e026517_P004 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
InterPro domains Description Start Stop
IPR005512 PRONE_dom 92 440
No external refs found!