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  5. Solyc12g008720.2.1

Solyc12g008720.2.1


Description : component RPL31 of LSU proteome component


Gene families : OG0002465 (Archaeplastida) Phylogenetic Tree(s): OG0002465_tree ,
OG_05_0002610 (LandPlants) Phylogenetic Tree(s): OG_05_0002610_tree ,
OG_06_0002770 (SeedPlants) Phylogenetic Tree(s): OG_06_0002770_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g008720.2.1
Cluster HCCA: Cluster_222

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00230660 evm_27.TU.AmTr_v1... No description available 0.07 Archaeplastida
AMTR_s00022p00233860 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.21 Archaeplastida
AT2G19740 No alias Ribosomal protein L31e family protein 0.05 Archaeplastida
AT4G26230 No alias Ribosomal protein L31e family protein 0.04 Archaeplastida
AT5G56710 No alias Ribosomal protein L31e family protein 0.13 Archaeplastida
Cpa|evm.model.tig00020703.20 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.32 Archaeplastida
Cre12.g489153 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.32 Archaeplastida
GSVIVT01015251001 No alias 60S ribosomal protein L31 OS=Nicotiana glutinosa 0.23 Archaeplastida
GSVIVT01032061001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.13 Archaeplastida
Gb_05851 No alias component RPL31 of LSU proteome component 0.14 Archaeplastida
Gb_24728 No alias component RPL31 of LSU proteome component 0.14 Archaeplastida
LOC_Os02g48660.1 No alias component RPL31 of LSU proteome component 0.2 Archaeplastida
LOC_Os06g21480.1 No alias component RPL31 of LSU proteome component 0.04 Archaeplastida
MA_14317g0010 No alias component RPL31 of LSU proteome component 0.12 Archaeplastida
MA_8286g0010 No alias component RPL31 of LSU proteome component 0.02 Archaeplastida
Mp7g18320.1 No alias component RPL31 of LSU proteome component 0.32 Archaeplastida
Pp3c10_8090V3.1 No alias Ribosomal protein L31e family protein 0.23 Archaeplastida
Pp3c14_7550V3.1 No alias Ribosomal protein L31e family protein 0.24 Archaeplastida
Pp3c1_34390V3.1 No alias Ribosomal protein L31e family protein 0.22 Archaeplastida
Pp3c25_8980V3.1 No alias Ribosomal protein L31e family protein 0.18 Archaeplastida
Pp3c2_16490V3.1 No alias Ribosomal protein L31e family protein 0.34 Archaeplastida
Smo268515 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.21 Archaeplastida
Zm00001e003520_P001 No alias component RPL31 of LSU proteome component 0.11 Archaeplastida
Zm00001e023413_P001 No alias component RPL31 of LSU proteome component 0.23 Archaeplastida
Zm00001e036927_P001 No alias component RPL31 of LSU proteome component 0.17 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000054 Ribosomal_L31e 11 92
No external refs found!