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  5. Solyc12g013630.1.1

Solyc12g013630.1.1


Description : subfamily ABCG transporter


Gene families : OG0000388 (Archaeplastida) Phylogenetic Tree(s): OG0000388_tree ,
OG_05_0000719 (LandPlants) Phylogenetic Tree(s): OG_05_0000719_tree ,
OG_06_0001337 (SeedPlants) Phylogenetic Tree(s): OG_06_0001337_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g013630.1.1
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00258490 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.05 Archaeplastida
AMTR_s00057p00214480 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 Archaeplastida
AMTR_s00061p00187570 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.09 Archaeplastida
AMTR_s00134p00069640 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.02 Archaeplastida
AT1G31770 ABCG14 ATP-binding cassette 14 0.02 Archaeplastida
AT3G13220 ABCG26, WBC27 ABC-2 type transporter family protein 0.15 Archaeplastida
Cpa|evm.model.tig00000692.51 No alias ABC transporter G family member 13 OS=Arabidopsis thaliana 0.02 Archaeplastida
Cre17.g717050 No alias ABC transporter G family member 21 OS=Arabidopsis thaliana 0.01 Archaeplastida
GSVIVT01001660001 No alias Solute transport.primary active transport.ABC... 0.05 Archaeplastida
GSVIVT01014402001 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
GSVIVT01014733001 No alias Solute transport.primary active transport.ABC... 0.15 Archaeplastida
Gb_00289 No alias sporopollenin precursor exporter. subfamily ABCG transporter 0.03 Archaeplastida
LOC_Os06g40550.1 No alias sporopollenin precursor exporter. subfamily ABCG transporter 0.15 Archaeplastida
MA_16472g0010 No alias ABC transporter G family member 26 OS=Arabidopsis... 0.04 Archaeplastida
Mp4g22510.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Mp6g05900.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
Pp3c11_25800V3.1 No alias ABC-2 type transporter family protein 0.04 Archaeplastida
Pp3c17_18730V3.1 No alias ABC-2 type transporter family protein 0.05 Archaeplastida
Solyc04g006960.3.1 No alias cytokinin transporter (ABCG14). subfamily ABCG transporter 0.04 Archaeplastida
Zm00001e037432_P001 No alias sporopollenin precursor exporter. subfamily ABCG transporter 0.13 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 61 212
IPR013525 ABC_2_trans 364 568
No external refs found!