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  5. AMTR_s00032p00243320

AMTR_s00032p00243320 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00032.288

Description : RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 10


Gene families : OG0004209 (Archaeplastida) Phylogenetic Tree(s): OG0004209_tree ,
OG_05_0004652 (LandPlants) Phylogenetic Tree(s): OG_05_0004652_tree ,
OG_06_0004386 (SeedPlants) Phylogenetic Tree(s): OG_06_0004386_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00032p00243320
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
AT1G11475 NRPB10, NRPD10, NRPE10 RNA polymerases N / 8 kDa subunit 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA Interproscan
BP GO:0006351 transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Neighborhood
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Neighborhood
BP GO:0006094 gluconeogenesis IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
InterPro domains Description Start Stop
IPR000268 RNAP_N/Rpb10 1 60
No external refs found!