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  5. Solyc12g015680.1.1

Solyc12g015680.1.1


Description : Protein TIC 20-v, chloroplastic OS=Arabidopsis thaliana (sp|q9fm67|ti205_arath : 227.0)


Gene families : OG0002993 (Archaeplastida) Phylogenetic Tree(s): OG0002993_tree ,
OG_05_0003951 (LandPlants) Phylogenetic Tree(s): OG_05_0003951_tree ,
OG_06_0009390 (SeedPlants) Phylogenetic Tree(s): OG_06_0009390_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g015680.1.1
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00250270 evm_27.TU.AmTr_v1... Protein TIC 20-v, chloroplastic OS=Arabidopsis thaliana 0.02 Archaeplastida
AT5G55710 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.06 Archaeplastida
Cre04.g225050 No alias Protein translocation.chloroplast.inner envelope TIC... 0.03 Archaeplastida
GSVIVT01014683001 No alias Protein TIC 20-v, chloroplastic OS=Arabidopsis thaliana 0.09 Archaeplastida
Gb_11070 No alias Protein TIC 20-II, chloroplastic OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_14527 No alias Protein TIC 20-v, chloroplastic OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os02g49470.1 No alias Protein TIC 20-v, chloroplastic OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR005691 Tic20 29 192
No external refs found!