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  4. Sequence
  5. Solyc12g026380.2.1

Solyc12g026380.2.1


Description : no hits & (original description: none)


Gene families : OG0002968 (Archaeplastida) Phylogenetic Tree(s): OG0002968_tree ,
OG_05_0001996 (LandPlants) Phylogenetic Tree(s): OG_05_0001996_tree ,
OG_06_0001116 (SeedPlants) Phylogenetic Tree(s): OG_06_0001116_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g026380.2.1
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
Solyc00g014290.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc00g500004.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc00g500006.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc00g500011.1.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc00g500013.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc00g500014.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc00g500018.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc00g500159.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc00g500177.1.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc00g500264.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc00g500289.1.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc00g500305.1.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc00g500374.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc00g500395.1.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc00g500398.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc00g500408.1.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc01g038231.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc01g038233.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc01g038234.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc01g038236.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc02g005550.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc03g046592.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g016685.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc06g016725.1.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc06g150106.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc11g051173.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc12g082798.1.1 No alias no hits & (original description: none) 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005047 signal recognition particle binding IEP Neighborhood
MF GO:0005048 signal sequence binding IEP Neighborhood
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006613 cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
MF GO:0008312 7S RNA binding IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
MF GO:0042277 peptide binding IEP Neighborhood
MF GO:0043021 ribonucleoprotein complex binding IEP Neighborhood
BP GO:0045047 protein targeting to ER IEP Neighborhood
CC GO:0048500 signal recognition particle IEP Neighborhood
BP GO:0070972 protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!