Solyc12g036475.1.1


Description : No annotation


Gene families : OG0000100 (Archaeplastida) Phylogenetic Tree(s): OG0000100_tree ,
OG_05_0000036 (LandPlants) Phylogenetic Tree(s): OG_05_0000036_tree ,
OG_06_0000011 (SeedPlants) Phylogenetic Tree(s): OG_06_0000011_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g036475.1.1
Cluster HCCA: Cluster_383

Target Alias Description ECC score Gene Family Method Actions
Solyc01g018045.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc01g067173.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc02g150117.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.02 Archaeplastida
Solyc03g013375.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.02 Archaeplastida
Solyc03g058915.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.02 Archaeplastida
Solyc04g005015.1.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc04g056727.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc04g074195.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.02 Archaeplastida
Solyc04g150121.1.1 No alias No annotation 0.02 Archaeplastida
Solyc05g016717.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.02 Archaeplastida
Solyc05g150126.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.02 Archaeplastida
Solyc06g043145.1.1 No alias No annotation 0.04 Archaeplastida
Solyc06g050925.1.1 No alias No annotation 0.02 Archaeplastida
Solyc07g015905.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.02 Archaeplastida
Solyc07g022915.1.1 No alias No annotation 0.02 Archaeplastida
Solyc07g040905.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.04 Archaeplastida
Solyc07g043485.1.1 No alias No annotation 0.02 Archaeplastida
Solyc07g045455.1.1 No alias No annotation 0.02 Archaeplastida
Solyc07g056702.1.1 No alias No annotation 0.04 Archaeplastida
Solyc07g061865.1.1 No alias No annotation 0.04 Archaeplastida
Solyc08g041825.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc08g042065.1.1 No alias No annotation 0.04 Archaeplastida
Solyc08g066495.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc09g059748.1.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Solyc10g017725.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc10g024387.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.05 Archaeplastida
Solyc10g049287.1.1 No alias No annotation 0.02 Archaeplastida
Solyc10g049715.1.1 No alias No annotation 0.02 Archaeplastida
Solyc10g049755.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.02 Archaeplastida
Solyc10g150107.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.02 Archaeplastida
Solyc11g010815.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.02 Archaeplastida
Solyc11g020847.1.1 No alias No annotation 0.03 Archaeplastida
Solyc11g032065.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.04 Archaeplastida
Solyc12g026475.1.1 No alias No annotation 0.02 Archaeplastida
Solyc12g042565.1.1 No alias No annotation 0.02 Archaeplastida
Solyc12g062207.1.1 No alias No annotation 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0005047 signal recognition particle binding IEP Neighborhood
MF GO:0005048 signal sequence binding IEP Neighborhood
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006613 cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Neighborhood
MF GO:0008312 7S RNA binding IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
MF GO:0042277 peptide binding IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
MF GO:0043021 ribonucleoprotein complex binding IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
BP GO:0045047 protein targeting to ER IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
CC GO:0048500 signal recognition particle IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0070972 protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!