1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc12g038520.3.1

Solyc12g038520.3.1


Description : no hits & (original description: none)


Gene families : OG0000102 (Archaeplastida) Phylogenetic Tree(s): OG0000102_tree ,
OG_05_0000092 (LandPlants) Phylogenetic Tree(s): OG_05_0000092_tree ,
OG_06_0000075 (SeedPlants) Phylogenetic Tree(s): OG_06_0000075_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g038520.3.1
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00235390 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
AT1G27360 SPL11 squamosa promoter-like 11 0.03 Archaeplastida
AT1G27370 SPL10 squamosa promoter binding protein-like 10 0.04 Archaeplastida
AT2G42200 AtSPL9, SPL9 squamosa promoter binding protein-like 9 0.03 Archaeplastida
Cre09.g399289 No alias RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
Cre17.g698233 No alias RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
GSVIVT01003836001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
GSVIVT01010496001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.04 Archaeplastida
GSVIVT01018204001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.08 Archaeplastida
GSVIVT01020050001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.05 Archaeplastida
GSVIVT01033519001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.03 Archaeplastida
Gb_26600 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g04680.1 No alias transcription factor (SBP) 0.03 Archaeplastida
LOC_Os02g08070.1 No alias transcription factor (SBP) 0.03 Archaeplastida
LOC_Os08g41940.1 No alias transcription factor (SBP) 0.04 Archaeplastida
MA_10429891g0020 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_10435426g0010 No alias transcription factor (SBP) 0.03 Archaeplastida
Pp3c16_7490V3.1 No alias squamosa promoter binding protein-like 2 0.03 Archaeplastida
Solyc02g077920.4.1 No alias transcription factor (SBP) 0.04 Archaeplastida
Zm00001e006686_P001 No alias transcription factor (SBP) 0.03 Archaeplastida
Zm00001e010067_P001 No alias transcription factor (SBP) 0.06 Archaeplastida
Zm00001e010124_P002 No alias transcription factor (SBP) 0.03 Archaeplastida
Zm00001e010443_P001 No alias transcription factor (SBP) 0.02 Archaeplastida
Zm00001e025234_P001 No alias transcription factor (SBP) 0.02 Archaeplastida
Zm00001e037693_P001 No alias transcription factor (SBP) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0004506 squalene monooxygenase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Neighborhood
CC GO:0005779 integral component of peroxisomal membrane IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0007031 peroxisome organization IEP Neighborhood
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Neighborhood
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Neighborhood
CC GO:0031300 intrinsic component of organelle membrane IEP Neighborhood
CC GO:0031301 integral component of organelle membrane IEP Neighborhood
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Neighborhood
CC GO:0044438 microbody part IEP Neighborhood
CC GO:0044439 peroxisomal part IEP Neighborhood
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Neighborhood
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!