Solyc12g042055.1.1


Description : no hits & (original description: none)


Gene families : OG0013650 (Archaeplastida) Phylogenetic Tree(s): OG0013650_tree ,
OG_05_0013443 (LandPlants) Phylogenetic Tree(s): OG_05_0013443_tree ,
OG_06_0013437 (SeedPlants) Phylogenetic Tree(s): OG_06_0013437_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g042055.1.1
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
Solyc09g055800.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc09g057930.3.1 No alias 1-aminocyclopropane-1-carboxylate oxidase homolog... 0.02 Archaeplastida
Solyc12g042020.3.1 No alias 1-aminocyclopropane-1-carboxylate oxidase homolog 10... 0.03 Archaeplastida
Solyc12g042030.3.1 No alias no hits & (original description: none) 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005047 signal recognition particle binding IEP Neighborhood
MF GO:0005048 signal sequence binding IEP Neighborhood
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006613 cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
MF GO:0008312 7S RNA binding IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
MF GO:0042277 peptide binding IEP Neighborhood
MF GO:0043021 ribonucleoprotein complex binding IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0045047 protein targeting to ER IEP Neighborhood
CC GO:0048500 signal recognition particle IEP Neighborhood
BP GO:0070972 protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!