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  5. Solyc12g056200.2.1

Solyc12g056200.2.1


Description : no hits & (original description: none)


Gene families : OG0000262 (Archaeplastida) Phylogenetic Tree(s): OG0000262_tree ,
OG_05_0000529 (LandPlants) Phylogenetic Tree(s): OG_05_0000529_tree ,
OG_06_0000300 (SeedPlants) Phylogenetic Tree(s): OG_06_0000300_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g056200.2.1
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00143300 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AT4G11350 No alias Protein of unknown function (DUF604) 0.05 Archaeplastida
AT5G12460 No alias Protein of unknown function (DUF604) 0.04 Archaeplastida
AT5G41460 No alias Protein of unknown function (DUF604) 0.03 Archaeplastida
GSVIVT01024903001 No alias No description available 0.02 Archaeplastida
LOC_Os03g16290.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_66888g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Pp3c3_13190V3.1 No alias Protein of unknown function (DUF604) 0.03 Archaeplastida
Pp3c9_2080V3.1 No alias Protein of unknown function (DUF604) 0.02 Archaeplastida
Solyc07g052630.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc09g011090.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc11g065440.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc11g065480.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc11g072700.2.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc12g099680.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e001192_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e007164_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006020 inositol metabolic process IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016052 carbohydrate catabolic process IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019310 inositol catabolic process IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
BP GO:0044275 cellular carbohydrate catabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0046164 alcohol catabolic process IEP Neighborhood
BP GO:0046174 polyol catabolic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
MF GO:0050113 inositol oxygenase activity IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901616 organic hydroxy compound catabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006740 DUF604 230 483
No external refs found!