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Description : PH, RCC1 and FYVE domains-containing protein 1 OS=Arabidopsis thaliana (sp|q947d2|praf1_arath : 852.0)
Gene families : OG0000543 (Archaeplastida) Phylogenetic Tree(s): OG0000543_tree ,
OG_05_0000407 (LandPlants) Phylogenetic Tree(s): OG_05_0000407_tree ,
OG_06_0000284 (SeedPlants) Phylogenetic Tree(s): OG_06_0000284_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc12g099740.2.1 | |
| Cluster | HCCA: Cluster_260 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| GSVIVT01013496001 | No alias | PH, RCC1 and FYVE domains-containing protein 1... | 0.07 | Archaeplastida | |
| LOC_Os01g72320.1 | No alias | PH, RCC1 and FYVE domains-containing protein 1... | 0.03 | Archaeplastida | |
| LOC_Os01g73410.1 | No alias | PH, RCC1 and FYVE domains-containing protein 1... | 0.06 | Archaeplastida | |
| Zm00001e015467_P001 | No alias | PH, RCC1 and FYVE domains-containing protein 1... | 0.04 | Archaeplastida | |
| Zm00001e023246_P001 | No alias | PH, RCC1 and FYVE domains-containing protein 1... | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0046872 | metal ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| BP | GO:0000272 | polysaccharide catabolic process | IEP | Neighborhood |
| MF | GO:0003712 | transcription coregulator activity | IEP | Neighborhood |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Neighborhood |
| MF | GO:0005524 | ATP binding | IEP | Neighborhood |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Neighborhood |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Neighborhood |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Neighborhood |
| BP | GO:0006644 | phospholipid metabolic process | IEP | Neighborhood |
| BP | GO:0006650 | glycerophospholipid metabolic process | IEP | Neighborhood |
| MF | GO:0008144 | drug binding | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| BP | GO:0009056 | catabolic process | IEP | Neighborhood |
| BP | GO:0009057 | macromolecule catabolic process | IEP | Neighborhood |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | Neighborhood |
| MF | GO:0016160 | amylase activity | IEP | Neighborhood |
| MF | GO:0016161 | beta-amylase activity | IEP | Neighborhood |
| MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | Neighborhood |
| CC | GO:0016592 | mediator complex | IEP | Neighborhood |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| MF | GO:0019899 | enzyme binding | IEP | Neighborhood |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| MF | GO:0031625 | ubiquitin protein ligase binding | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0033926 | glycopeptide alpha-N-acetylgalactosaminidase activity | IEP | Neighborhood |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Neighborhood |
| BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
| MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | Neighborhood |
| CC | GO:0044451 | nucleoplasm part | IEP | Neighborhood |
| BP | GO:0046486 | glycerolipid metabolic process | IEP | Neighborhood |
| BP | GO:0046488 | phosphatidylinositol metabolic process | IEP | Neighborhood |
| BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| MF | GO:0140103 | catalytic activity, acting on a glycoprotein | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| BP | GO:1901575 | organic substance catabolic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001849 | PH_domain | 23 | 129 |
| IPR013591 | Brevis_radix_dom | 1033 | 1088 |
| IPR027988 | BRX_N | 917 | 951 |
| IPR000408 | Reg_chr_condens | 605 | 652 |
| IPR000408 | Reg_chr_condens | 551 | 600 |
| IPR000408 | Reg_chr_condens | 436 | 484 |
| IPR000408 | Reg_chr_condens | 499 | 548 |
| IPR000408 | Reg_chr_condens | 331 | 379 |
| IPR000408 | Reg_chr_condens | 382 | 432 |
| IPR000306 | Znf_FYVE | 656 | 722 |
| No external refs found! |