Solyc12g100010.1.1


Description : Receptor-like protein Cf-9 homolog OS=Solanum lycopersicum (sp|o49879|cf0_sollc : 637.0)


Gene families : OG0001756 (Archaeplastida) Phylogenetic Tree(s): OG0001756_tree ,
OG_05_0001185 (LandPlants) Phylogenetic Tree(s): OG_05_0001185_tree ,
OG_06_0000788 (SeedPlants) Phylogenetic Tree(s): OG_06_0000788_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g100010.1.1
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01012274001 No alias Receptor-like protein 9DC3 OS=Solanum pimpinellifolium 0.02 Archaeplastida
GSVIVT01020334001 No alias Receptor-like protein 9DC3 OS=Solanum pimpinellifolium 0.05 Archaeplastida
GSVIVT01036792001 No alias Receptor-like protein 9DC3 OS=Solanum pimpinellifolium 0.05 Archaeplastida
GSVIVT01037157001 No alias Receptor-like protein 12 OS=Arabidopsis thaliana 0.07 Archaeplastida
GSVIVT01037158001 No alias Receptor-like protein 30 OS=Arabidopsis thaliana 0.01 Archaeplastida
Solyc01g005710.2.1 No alias Receptor-like protein Cf-9 OS=Solanum pimpinellifolium... 0.03 Archaeplastida
Solyc01g005780.1.1 No alias Receptor-like protein Cf-9 homolog OS=Solanum... 0.04 Archaeplastida
Solyc01g005870.3.1 No alias Receptor-like protein Cf-9 OS=Solanum pimpinellifolium... 0.04 Archaeplastida
Solyc01g006550.3.1 No alias Receptor-like protein Cf-9 homolog OS=Solanum... 0.04 Archaeplastida
Solyc01g009690.3.1 No alias Receptor-like protein Cf-9 homolog OS=Solanum... 0.09 Archaeplastida
Solyc01g009700.3.1 No alias Receptor-like protein 9DC3 OS=Solanum pimpinellifolium... 0.03 Archaeplastida
Solyc01g009930.3.1 No alias Receptor-like protein Cf-9 homolog OS=Solanum... 0.07 Archaeplastida
Solyc01g098370.1.1 No alias Receptor-like protein 9DC3 OS=Solanum pimpinellifolium... 0.04 Archaeplastida
Solyc05g012430.1.1 No alias MDIS1-interacting receptor like kinase 2 OS=Arabidopsis... 0.03 Archaeplastida
Solyc06g008270.2.1 No alias Receptor-like protein Cf-9 homolog OS=Solanum... 0.06 Archaeplastida
Solyc12g099870.3.1 No alias Receptor-like protein Cf-9 homolog OS=Solanum... 0.05 Archaeplastida
Solyc12g099950.3.1 No alias Receptor-like protein Cf-9 homolog OS=Solanum... 0.03 Archaeplastida
Solyc12g099980.3.1 No alias Receptor-like protein Cf-9 homolog OS=Solanum... 0.03 Archaeplastida
Solyc12g100030.2.1 No alias Receptor-like protein Cf-9 OS=Solanum pimpinellifolium... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
BP GO:0007275 multicellular organism development IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008883 glutamyl-tRNA reductase activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
BP GO:0045927 positive regulation of growth IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 26 78
IPR001611 Leu-rich_rpt 282 342
IPR001611 Leu-rich_rpt 565 624
IPR001611 Leu-rich_rpt 753 811
IPR018121 7-in-absentia-prot_TRAF-dom 921 993
No external refs found!