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  5. GSVIVT01000232001

GSVIVT01000232001


Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0000006 (SeedPlants) Phylogenetic Tree(s): OG_06_0000006_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01000232001
Cluster HCCA: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00076p00157170 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AT1G34670 AtMYB93, MYB93 myb domain protein 93 0.02 Archaeplastida
AT1G66230 AtMYB20, MYB20 myb domain protein 20 0.03 Archaeplastida
AT1G73410 MYB54, ATMYB54 myb domain protein 54 0.03 Archaeplastida
AT3G01140 MYB106, NOK, AtMYB106 myb domain protein 106 0.03 Archaeplastida
AT3G01530 MYB57, ATMYB57 myb domain protein 57 0.02 Archaeplastida
AT3G06490 BOS1, AtMYB108, MYB108 myb domain protein 108 0.04 Archaeplastida
AT3G12720 ATY53, ATMYB67, MYB67 myb domain protein 67 0.03 Archaeplastida
AT3G27810 ATMYB21, MYB21, ATMYB3 myb domain protein 21 0.02 Archaeplastida
AT3G29020 MYB110, AtMYB110 myb domain protein 110 0.03 Archaeplastida
AT3G53200 AtMYB27, MYB27 myb domain protein 27 0.02 Archaeplastida
AT4G28110 MYB41, AtMYB41 myb domain protein 41 0.04 Archaeplastida
AT5G40350 MYB24, AtMYB24 myb domain protein 24 0.03 Archaeplastida
AT5G40360 MYB115, AtMYB115 myb domain protein 115 0.03 Archaeplastida
AT5G49330 PFG3, ATMYB111, MYB111 myb domain protein 111 0.03 Archaeplastida
Cre01.g034350 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
Cre02.g108350 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Cre09.g399067 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01007740001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01009032001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01009280001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01012447001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01013126001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01015264001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01019967001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01024353001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01028981001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01028984001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01035177001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Gb_00379 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_03994 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_05115 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_09998 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_11316 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_13117 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_32143 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_39852 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g50110.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g74590.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os02g51799.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os03g18480.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os03g51110.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os04g39470.1 No alias transcription factor (MYB). transcriptional key... 0.02 Archaeplastida
LOC_Os04g43680.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os05g35500.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os06g02250.1 No alias transcription factor (MYB) 0.06 Archaeplastida
LOC_Os06g43090.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os07g31470.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os09g24800.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os11g35390.1 No alias transcription factor (MYB) 0.05 Archaeplastida
MA_55123g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_64405g0010 No alias transcription factor (MYB) 0.06 Archaeplastida
MA_79447g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_83918g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_93127g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
Mp3g05910.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Pp3c1_1650V3.1 No alias myb domain protein 105 0.04 Archaeplastida
Pp3c9_10290V3.1 No alias myb domain protein 55 0.03 Archaeplastida
Solyc01g010910.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g067340.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g088190.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g091980.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc03g059200.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc03g116100.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc04g078420.1.1 No alias transcription factor (MYB) 0.14 Archaeplastida
Solyc05g007690.2.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc05g007710.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc05g048830.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc06g009710.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc07g053240.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc10g005760.3.1 No alias transcription factor (MYB). transcriptional key... 0.02 Archaeplastida
Solyc12g008670.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e001341_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e003407_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e004114_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e007085_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e007904_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e009453_P002 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e011944_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e013910_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e014925_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e015884_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e024606_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e033519_P001 No alias transcription factor (MYB) 0.09 Archaeplastida
Zm00001e034118_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e038356_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e041055_P001 No alias transcription factor (MYB). transcriptional key... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
CC GO:0030286 dynein complex IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 61
IPR001005 SANT/Myb 67 111
No external refs found!