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  5. GSVIVT01002904001

GSVIVT01002904001


Description : Magnesium-chelatase subunit ChlD, chloroplastic OS=Oryza sativa subsp. indica


Gene families : OG0004141 (Archaeplastida) Phylogenetic Tree(s): OG0004141_tree ,
OG_05_0005299 (LandPlants) Phylogenetic Tree(s): OG_05_0005299_tree ,
OG_06_0005560 (SeedPlants) Phylogenetic Tree(s): OG_06_0005560_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01002904001
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00053p00152680 evm_27.TU.AmTr_v1... Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.03 Archaeplastida
AT1G08520 V157, PDE166,... ALBINA 1 0.08 Archaeplastida
Cre05.g242000 No alias Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.03 Archaeplastida
LOC_Os03g59640.1 No alias component CHL-D of magnesium-chelatase complex 0.05 Archaeplastida
MA_10428524g0010 No alias Magnesium-chelatase subunit ChlD, chloroplastic OS=Pisum... 0.03 Archaeplastida
MA_159069g0010 No alias Magnesium-chelatase subunit ChlD, chloroplastic... 0.03 Archaeplastida
MA_173818g0010 No alias Magnesium-chelatase subunit ChlD, chloroplastic... 0.03 Archaeplastida
Mp6g04260.1 No alias component CHL-D of magnesium-chelatase complex 0.03 Archaeplastida
Pp3c15_25050V3.1 No alias ALBINA 1 0.05 Archaeplastida
Smo174616 No alias Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.04 Archaeplastida
Solyc04g015490.4.1 No alias component CHL-D of magnesium-chelatase complex 0.03 Archaeplastida
Zm00001e011796_P001 No alias component CHL-D of magnesium-chelatase complex 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003725 double-stranded RNA binding IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006613 cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0045047 protein targeting to ER IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
MF GO:0061505 DNA topoisomerase II activity IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0070972 protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR025558 DUF4283 339 483
No external refs found!