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  5. GSVIVT01003702001

GSVIVT01003702001


Description : Chromatin organisation.histone modifications.histone lysine methylation/demethylation.COMPASS histone trimethylation complex.WDR5 component


Gene families : OG0001835 (Archaeplastida) Phylogenetic Tree(s): OG0001835_tree ,
OG_05_0001929 (LandPlants) Phylogenetic Tree(s): OG_05_0001929_tree ,
OG_06_0001958 (SeedPlants) Phylogenetic Tree(s): OG_06_0001958_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01003702001
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
Cre08.g367650 No alias Chromatin organisation.histone modifications.histone... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
MF GO:0008097 5S rRNA binding IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 139 177
IPR001680 WD40_repeat 98 135
IPR001680 WD40_repeat 182 220
IPR001680 WD40_repeat 57 93
IPR001680 WD40_repeat 270 308
IPR001680 WD40_repeat 224 264
IPR001680 WD40_repeat 14 49
No external refs found!