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  5. GSVIVT01004782001

GSVIVT01004782001


Description : RNA biosynthesis.transcriptional activation.PLATZ transcription factor


Gene families : OG0000197 (Archaeplastida) Phylogenetic Tree(s): OG0000197_tree ,
OG_05_0000880 (LandPlants) Phylogenetic Tree(s): OG_05_0000880_tree ,
OG_06_0001431 (SeedPlants) Phylogenetic Tree(s): OG_06_0001431_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01004782001
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00208550 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PLATZ... 0.02 Archaeplastida
AT1G43000 No alias PLATZ transcription factor family protein 0.05 Archaeplastida
GSVIVT01012125001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.05 Archaeplastida
Gb_32018 No alias transcription factor (PLATZ) 0.04 Archaeplastida
LOC_Os02g46610.1 No alias transcription factor (PLATZ) 0.04 Archaeplastida
LOC_Os06g41930.2 No alias transcription factor (PLATZ) 0.03 Archaeplastida
Smo26454 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.04 Archaeplastida
Smo425306 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.03 Archaeplastida
Solyc01g091000.4.1 No alias transcription factor (PLATZ) 0.05 Archaeplastida
Solyc08g005100.3.1 No alias transcription factor (PLATZ) 0.05 Archaeplastida
Solyc08g076860.3.1 No alias transcription factor (PLATZ) 0.05 Archaeplastida
Zm00001e002426_P001 No alias transcription factor (PLATZ) 0.04 Archaeplastida
Zm00001e041404_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0016289 CoA hydrolase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016790 thiolester hydrolase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR006734 DUF597 65 136
No external refs found!