AMTR_s00036p00071330 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00036.25

Description : Developmentally-regulated G-protein 2 OS=Arabidopsis thaliana

Gene families : OG0001977 (Archaeplastida) Phylogenetic Tree(s): OG0001977_tree ,
OG_05_0006855 (LandPlants) Phylogenetic Tree(s): OG_05_0006855_tree ,
OG_06_0007897 (SeedPlants) Phylogenetic Tree(s): OG_06_0007897_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00036p00071330
Cluster	HCCA: Cluster_247

Target	Alias	Description	ECC score	Gene Family Method
AT4G39520	No alias	GTP-binding protein-related	0.03	Archaeplastida
Cpa\|evm.model.tig00021319.31	No alias	Developmentally-regulated G-protein 3 OS=Arabidopsis thaliana	0.02	Archaeplastida
Cre01.g058886	No alias	Developmentally-regulated G-protein 2 OS=Arabidopsis thaliana	0.02	Archaeplastida
Cre06.g252450	No alias	Developmentally-regulated G-protein 3 OS=Arabidopsis thaliana	0.01	Archaeplastida
Gb_16052	No alias	Developmentally-regulated G-protein 2 OS=Arabidopsis...	0.02	Archaeplastida
LOC_Os05g28940.1	No alias	Developmentally-regulated G-protein 2 OS=Arabidopsis...	0.02	Archaeplastida
Mp3g16620.1	No alias	Developmentally-regulated G-protein 3 OS=Arabidopsis...	0.02	Archaeplastida
Pp3c17_5590V3.1	No alias	GTP-binding protein-related	0.02	Archaeplastida
Solyc03g121980.3.1	No alias	Developmentally-regulated G-protein 1 OS=Arabidopsis...	0.02	Archaeplastida
Solyc04g051830.4.1	No alias	Developmentally-regulated G-protein 3 OS=Arabidopsis...	0.02	Archaeplastida
Zm00001e039094_P001	No alias	Developmentally-regulated G-protein 2 OS=Arabidopsis...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	Neighborhood
CC	GO:0000428	DNA-directed RNA polymerase complex	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0003857	3-hydroxyacyl-CoA dehydrogenase activity	IEP	Neighborhood
MF	GO:0003995	acyl-CoA dehydrogenase activity	IEP	Neighborhood
MF	GO:0004003	ATP-dependent DNA helicase activity	IEP	Neighborhood
MF	GO:0004488	methylenetetrahydrofolate dehydrogenase (NADP+) activity	IEP	Neighborhood
MF	GO:0004576	oligosaccharyl transferase activity	IEP	Neighborhood
MF	GO:0004579	dolichyl-diphosphooligosaccharide-protein glycotransferase activity	IEP	Neighborhood
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
MF	GO:0005524	ATP binding	IEP	Neighborhood
CC	GO:0005575	cellular_component	IEP	Neighborhood
CC	GO:0005622	intracellular	IEP	Neighborhood
CC	GO:0005666	RNA polymerase III complex	IEP	Neighborhood
CC	GO:0005737	cytoplasm	IEP	Neighborhood
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Neighborhood
CC	GO:0005938	cell cortex	IEP	Neighborhood
BP	GO:0006082	organic acid metabolic process	IEP	Neighborhood
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006383	transcription by RNA polymerase III	IEP	Neighborhood
BP	GO:0006399	tRNA metabolic process	IEP	Neighborhood
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Neighborhood
BP	GO:0006457	protein folding	IEP	Neighborhood
BP	GO:0006487	protein N-linked glycosylation	IEP	Neighborhood
BP	GO:0006508	proteolysis	IEP	Neighborhood
BP	GO:0006520	cellular amino acid metabolic process	IEP	Neighborhood
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Neighborhood
BP	GO:0006760	folic acid-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006807	nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0006886	intracellular protein transport	IEP	Neighborhood
MF	GO:0008026	ATP-dependent helicase activity	IEP	Neighborhood
MF	GO:0008144	drug binding	IEP	Neighborhood
BP	GO:0008150	biological_process	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
MF	GO:0008168	methyltransferase activity	IEP	Neighborhood
MF	GO:0008233	peptidase activity	IEP	Neighborhood
MF	GO:0008236	serine-type peptidase activity	IEP	Neighborhood
MF	GO:0008641	ubiquitin-like modifier activating enzyme activity	IEP	Neighborhood
BP	GO:0008653	lipopolysaccharide metabolic process	IEP	Neighborhood
BP	GO:0009103	lipopolysaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0009396	folic acid-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:0009987	cellular process	IEP	Neighborhood
BP	GO:0016070	RNA metabolic process	IEP	Neighborhood
BP	GO:0016255	attachment of GPI anchor to protein	IEP	Neighborhood
CC	GO:0016272	prefoldin complex	IEP	Neighborhood
MF	GO:0016646	oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Neighborhood
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	Neighborhood
MF	GO:0016841	ammonia-lyase activity	IEP	Neighborhood
MF	GO:0016874	ligase activity	IEP	Neighborhood
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Neighborhood
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	IEP	Neighborhood
MF	GO:0017171	serine hydrolase activity	IEP	Neighborhood
BP	GO:0018196	peptidyl-asparagine modification	IEP	Neighborhood
BP	GO:0018279	protein N-linked glycosylation via asparagine	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
BP	GO:0019752	carboxylic acid metabolic process	IEP	Neighborhood
CC	GO:0030119	AP-type membrane coat adaptor complex	IEP	Neighborhood
CC	GO:0030131	clathrin adaptor complex	IEP	Neighborhood
MF	GO:0030554	adenyl nucleotide binding	IEP	Neighborhood
CC	GO:0030880	RNA polymerase complex	IEP	Neighborhood
MF	GO:0031072	heat shock protein binding	IEP	Neighborhood
BP	GO:0032065	cortical protein anchoring	IEP	Neighborhood
BP	GO:0032507	maintenance of protein location in cell	IEP	Neighborhood
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Neighborhood
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0034660	ncRNA metabolic process	IEP	Neighborhood
BP	GO:0042559	pteridine-containing compound biosynthetic process	IEP	Neighborhood
CC	GO:0042765	GPI-anchor transamidase complex	IEP	Neighborhood
BP	GO:0043038	amino acid activation	IEP	Neighborhood
BP	GO:0043039	tRNA aminoacylation	IEP	Neighborhood
MF	GO:0043138	3'-5' DNA helicase activity	IEP	Neighborhood
MF	GO:0043140	ATP-dependent 3'-5' DNA helicase activity	IEP	Neighborhood
BP	GO:0043170	macromolecule metabolic process	IEP	Neighborhood
BP	GO:0043436	oxoacid metabolic process	IEP	Neighborhood
BP	GO:0044237	cellular metabolic process	IEP	Neighborhood
BP	GO:0044238	primary metabolic process	IEP	Neighborhood
BP	GO:0044281	small molecule metabolic process	IEP	Neighborhood
CC	GO:0044424	intracellular part	IEP	Neighborhood
CC	GO:0044432	endoplasmic reticulum part	IEP	Neighborhood
CC	GO:0044464	cell part	IEP	Neighborhood
BP	GO:0045116	protein neddylation	IEP	Neighborhood
BP	GO:0045185	maintenance of protein location	IEP	Neighborhood
BP	GO:0046483	heterocycle metabolic process	IEP	Neighborhood
BP	GO:0046907	intracellular transport	IEP	Neighborhood
MF	GO:0051082	unfolded protein binding	IEP	Neighborhood
BP	GO:0051235	maintenance of location	IEP	Neighborhood
BP	GO:0051649	establishment of localization in cell	IEP	Neighborhood
BP	GO:0051651	maintenance of location in cell	IEP	Neighborhood
CC	GO:0055029	nuclear DNA-directed RNA polymerase complex	IEP	Neighborhood
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	IEP	Neighborhood
MF	GO:0070035	purine NTP-dependent helicase activity	IEP	Neighborhood
BP	GO:0071704	organic substance metabolic process	IEP	Neighborhood
BP	GO:0090304	nucleic acid metabolic process	IEP	Neighborhood
CC	GO:0099568	cytoplasmic region	IEP	Neighborhood
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Neighborhood
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	Neighborhood
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Neighborhood
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR004095	TGS	290	366
IPR006073	GTP_binding_domain	64	180

External Links

No external refs found!

AMTR_s00036p00071330 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation