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  5. GSVIVT01008221001

GSVIVT01008221001


No description available


Gene families : OG0002600 (Archaeplastida) Phylogenetic Tree(s): OG0002600_tree ,
OG_05_0002528 (LandPlants) Phylogenetic Tree(s): OG_05_0002528_tree ,
OG_06_0006698 (SeedPlants) Phylogenetic Tree(s): OG_06_0006698_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01008221001
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00098010 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
Gb_03739 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_12594 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g57160.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc03g119870.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc07g056030.3.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e027836_P004 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e032812_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005669 transcription factor TFIID complex IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006721 terpenoid metabolic process IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Neighborhood
BP GO:0016114 terpenoid biosynthetic process IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
InterPro domains Description Start Stop
IPR012935 Znf_C3HC-like 73 196
No external refs found!