GSVIVT01008234001


Description : RNA biosynthesis.transcriptional activation.TCP transcription factor


Gene families : OG0000332 (Archaeplastida) Phylogenetic Tree(s): OG0000332_tree ,
OG_05_0000167 (LandPlants) Phylogenetic Tree(s): OG_05_0000167_tree ,
OG_06_0000105 (SeedPlants) Phylogenetic Tree(s): OG_06_0000105_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01008234001
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00041830 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TCP... 0.04 Archaeplastida
AMTR_s00154p00072430 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TCP... 0.1 Archaeplastida
GSVIVT01008109001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.06 Archaeplastida
GSVIVT01011962001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.1 Archaeplastida
Gb_30049 No alias transcription factor (TCP) 0.04 Archaeplastida
Gb_38376 No alias transcription factor (TCP) 0.04 Archaeplastida
LOC_Os03g57190.1 No alias transcription factor (TCP) 0.04 Archaeplastida
LOC_Os09g24480.1 No alias transcription factor (TCP) 0.03 Archaeplastida
MA_101752g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_10426407g0020 No alias transcription factor (TCP) 0.03 Archaeplastida
MA_16704g0010 No alias transcription factor (TCP) 0.04 Archaeplastida
MA_35349g0010 No alias transcription factor (TCP) 0.03 Archaeplastida
MA_78665g0010 No alias transcription factor (TCP) 0.04 Archaeplastida
Smo89227 No alias RNA biosynthesis.transcriptional activation.TCP... 0.04 Archaeplastida
Solyc01g016414.1.1 No alias transcription factor (TCP) 0.02 Archaeplastida
Solyc02g089020.2.1 No alias transcription factor (TCP) 0.04 Archaeplastida
Solyc03g115010.3.1 No alias transcription factor (TCP) 0.04 Archaeplastida
Solyc04g006980.1.1 No alias transcription factor (TCP) 0.04 Archaeplastida
Solyc05g009900.3.1 No alias transcription factor (TCP) 0.04 Archaeplastida
Solyc06g069460.3.1 No alias transcription factor (TCP) 0.14 Archaeplastida
Zm00001e005909_P001 No alias transcription factor (TCP) 0.06 Archaeplastida
Zm00001e011516_P001 No alias transcription factor (TCP) 0.07 Archaeplastida
Zm00001e011911_P001 No alias transcription factor (TCP) 0.04 Archaeplastida
Zm00001e032122_P001 No alias transcription factor (TCP) 0.08 Archaeplastida
Zm00001e032821_P001 No alias transcription factor (TCP) 0.06 Archaeplastida
Zm00001e035648_P002 No alias transcription factor (TCP) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0045017 glycerolipid biosynthetic process IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 137 203
No external refs found!