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  5. GSVIVT01008260001

GSVIVT01008260001


Description : Vesicle trafficking.endomembrane trafficking.post-Golgi trafficking.SCD complex.SCD1 protein


Gene families : OG0004026 (Archaeplastida) Phylogenetic Tree(s): OG0004026_tree ,
OG_05_0006017 (LandPlants) Phylogenetic Tree(s): OG_05_0006017_tree ,
OG_06_0006413 (SeedPlants) Phylogenetic Tree(s): OG_06_0006413_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01008260001
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
AT1G49040 SCD1 stomatal cytokinesis defective / SCD1 protein (SCD1) 0.07 Archaeplastida
Cpa|evm.model.tig00021126.8 No alias No description available 0.02 Archaeplastida
LOC_Os01g39380.1 No alias SCD1 component of post-Golgi trafficking SCD complex 0.08 Archaeplastida
Mp5g20500.1 No alias SCD1 component of post-Golgi trafficking SCD complex 0.03 Archaeplastida
Pp3c26_9700V3.1 No alias stomatal cytokinesis defective / SCD1 protein (SCD1) 0.06 Archaeplastida
Smo118822 No alias Vesicle trafficking.endomembrane trafficking.post-Golgi... 0.04 Archaeplastida
Zm00001e020506_P001 No alias SCD1 component of post-Golgi trafficking SCD complex 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003689 DNA clamp loader activity IEP Neighborhood
MF GO:0003909 DNA ligase activity IEP Neighborhood
MF GO:0003910 DNA ligase (ATP) activity IEP Neighborhood
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP Neighborhood
MF GO:0004057 arginyltransferase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004559 alpha-mannosidase activity IEP Neighborhood
MF GO:0004565 beta-galactosidase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
CC GO:0005663 DNA replication factor C complex IEP Neighborhood
BP GO:0006013 mannose metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006474 N-terminal protein amino acid acetylation IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
CC GO:0009341 beta-galactosidase complex IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
MF GO:0015923 mannosidase activity IEP Neighborhood
MF GO:0015925 galactosidase activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
BP GO:0016598 protein arginylation IEP Neighborhood
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0017196 N-terminal peptidyl-methionine acetylation IEP Neighborhood
BP GO:0018206 peptidyl-methionine modification IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
CC GO:0031248 protein acetyltransferase complex IEP Neighborhood
BP GO:0031365 N-terminal protein amino acid modification IEP Neighborhood
CC GO:0031414 N-terminal protein acetyltransferase complex IEP Neighborhood
CC GO:0031417 NatC complex IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
MF GO:0032947 protein-containing complex scaffold activity IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
MF GO:0033170 protein-DNA loading ATPase activity IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
CC GO:1902493 acetyltransferase complex IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood
InterPro domains Description Start Stop
IPR005113 uDENN_dom 36 103
IPR001194 cDENN_dom 124 290
IPR001680 WD40_repeat 896 943
IPR001680 WD40_repeat 990 1026
IPR001680 WD40_repeat 953 985
IPR001680 WD40_repeat 1073 1108
No external refs found!