1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01008742001

GSVIVT01008742001


Description : Pentatricopeptide repeat-containing protein At1g20300, mitochondrial OS=Arabidopsis thaliana


Gene families : OG0025008 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000102 (LandPlants) Phylogenetic Tree(s): OG_05_0000102_tree ,
OG_06_0009795 (SeedPlants) Phylogenetic Tree(s): OG_06_0009795_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01008742001
Cluster HCCA: Cluster_236


Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
CC GO:0031360 intrinsic component of thylakoid membrane IEP Neighborhood
CC GO:0031361 integral component of thylakoid membrane IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 213 262
IPR002885 Pentatricopeptide_repeat 387 435
IPR002885 Pentatricopeptide_repeat 283 332
IPR002885 Pentatricopeptide_repeat 183 209
IPR002885 Pentatricopeptide_repeat 152 177
IPR002885 Pentatricopeptide_repeat 356 385
No external refs found!