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Description : Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin establishment.PDS5 cohesin cofactor
Gene families : OG0000410 (Archaeplastida) Phylogenetic Tree(s): OG0000410_tree ,
OG_05_0002118 (LandPlants) Phylogenetic Tree(s): OG_05_0002118_tree ,
OG_06_0002144 (SeedPlants) Phylogenetic Tree(s): OG_06_0002144_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01008876001 | |
| Cluster | HCCA: Cluster_123 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00017p00192140 | evm_27.TU.AmTr_v1... | Cell cycle.mitosis and meiosis.sister chromatid... | 0.05 | Archaeplastida | |
| AMTR_s00065p00174980 | evm_27.TU.AmTr_v1... | Cell cycle.mitosis and meiosis.sister chromatid... | 0.04 | Archaeplastida | |
| AT1G77600 | No alias | ARM repeat superfamily protein | 0.11 | Archaeplastida | |
| AT4G31880 | No alias | LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 24 plant... | 0.07 | Archaeplastida | |
| AT5G47690 | No alias | binding | 0.04 | Archaeplastida | |
| Cpa|evm.model.tig00000076.96 | No alias | No description available | 0.03 | Archaeplastida | |
| GSVIVT01035890001 | No alias | Cell cycle.mitosis and meiosis.sister chromatid... | 0.04 | Archaeplastida | |
| Gb_09525 | No alias | cohesin cofactor (PDS5) | 0.05 | Archaeplastida | |
| Gb_23673 | No alias | cohesin cofactor (PDS5) | 0.07 | Archaeplastida | |
| LOC_Os01g64900.1 | No alias | cohesin cofactor (PDS5) | 0.04 | Archaeplastida | |
| LOC_Os02g39920.1 | No alias | cohesin cofactor (PDS5) | 0.05 | Archaeplastida | |
| MA_10433886g0010 | No alias | cohesin cofactor (PDS5) | 0.02 | Archaeplastida | |
| MA_10434588g0010 | No alias | cohesin cofactor (PDS5) | 0.02 | Archaeplastida | |
| Mp3g13850.1 | No alias | cohesin cofactor (PDS5) | 0.03 | Archaeplastida | |
| Pp3c10_24900V3.1 | No alias | binding | 0.05 | Archaeplastida | |
| Pp3c20_23000V3.1 | No alias | binding | 0.02 | Archaeplastida | |
| Pp3c23_10270V3.1 | No alias | binding | 0.07 | Archaeplastida | |
| Solyc03g117010.4.1 | No alias | cohesin cofactor (PDS5) | 0.05 | Archaeplastida | |
| Solyc06g065710.3.1 | No alias | cohesin cofactor (PDS5) | 0.05 | Archaeplastida | |
| Solyc11g012770.2.1 | No alias | cohesin cofactor (PDS5) | 0.06 | Archaeplastida | |
| Zm00001e007658_P001 | No alias | cohesin cofactor (PDS5) | 0.03 | Archaeplastida | |
| Zm00001e015094_P002 | No alias | cohesin cofactor (PDS5) | 0.04 | Archaeplastida | |
| Zm00001e019139_P001 | No alias | cohesin cofactor (PDS5) | 0.05 | Archaeplastida | |
| Zm00001e019144_P001 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| Zm00001e022962_P003 | No alias | cohesin cofactor (PDS5) | 0.07 | Archaeplastida | |
| Zm00001e030989_P001 | No alias | cohesin cofactor (PDS5) | 0.04 | Archaeplastida | |
| Zm00001e036853_P003 | No alias | cohesin cofactor (PDS5) | 0.03 | Archaeplastida | |
| Zm00001e041168_P001 | No alias | cohesin cofactor (PDS5) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | Neighborhood |
| CC | GO:0000148 | 1,3-beta-D-glucan synthase complex | IEP | Neighborhood |
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| BP | GO:0000271 | polysaccharide biosynthetic process | IEP | Neighborhood |
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Neighborhood |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Neighborhood |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0003689 | DNA clamp loader activity | IEP | Neighborhood |
| MF | GO:0003690 | double-stranded DNA binding | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0003843 | 1,3-beta-D-glucan synthase activity | IEP | Neighborhood |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Neighborhood |
| MF | GO:0004197 | cysteine-type endopeptidase activity | IEP | Neighborhood |
| MF | GO:0004198 | calcium-dependent cysteine-type endopeptidase activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| MF | GO:0005524 | ATP binding | IEP | Neighborhood |
| CC | GO:0005634 | nucleus | IEP | Neighborhood |
| CC | GO:0005643 | nuclear pore | IEP | Neighborhood |
| CC | GO:0005663 | DNA replication factor C complex | IEP | Neighborhood |
| CC | GO:0005789 | endoplasmic reticulum membrane | IEP | Neighborhood |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | Neighborhood |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | Neighborhood |
| BP | GO:0006074 | (1->3)-beta-D-glucan metabolic process | IEP | Neighborhood |
| BP | GO:0006075 | (1->3)-beta-D-glucan biosynthetic process | IEP | Neighborhood |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
| BP | GO:0006281 | DNA repair | IEP | Neighborhood |
| BP | GO:0006298 | mismatch repair | IEP | Neighborhood |
| BP | GO:0006351 | transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006479 | protein methylation | IEP | Neighborhood |
| BP | GO:0006497 | protein lipidation | IEP | Neighborhood |
| BP | GO:0006505 | GPI anchor metabolic process | IEP | Neighborhood |
| BP | GO:0006506 | GPI anchor biosynthetic process | IEP | Neighborhood |
| BP | GO:0006508 | proteolysis | IEP | Neighborhood |
| BP | GO:0006643 | membrane lipid metabolic process | IEP | Neighborhood |
| BP | GO:0006661 | phosphatidylinositol biosynthetic process | IEP | Neighborhood |
| BP | GO:0006664 | glycolipid metabolic process | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0006950 | response to stress | IEP | Neighborhood |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Neighborhood |
| MF | GO:0008081 | phosphoric diester hydrolase activity | IEP | Neighborhood |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | Neighborhood |
| MF | GO:0008094 | DNA-dependent ATPase activity | IEP | Neighborhood |
| MF | GO:0008144 | drug binding | IEP | Neighborhood |
| BP | GO:0008152 | metabolic process | IEP | Neighborhood |
| MF | GO:0008170 | N-methyltransferase activity | IEP | Neighborhood |
| BP | GO:0008213 | protein alkylation | IEP | Neighborhood |
| MF | GO:0008276 | protein methyltransferase activity | IEP | Neighborhood |
| BP | GO:0008380 | RNA splicing | IEP | Neighborhood |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0009247 | glycolipid biosynthetic process | IEP | Neighborhood |
| BP | GO:0009250 | glucan biosynthetic process | IEP | Neighborhood |
| BP | GO:0009987 | cellular process | IEP | Neighborhood |
| MF | GO:0015631 | tubulin binding | IEP | Neighborhood |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | Neighborhood |
| BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
| MF | GO:0016278 | lysine N-methyltransferase activity | IEP | Neighborhood |
| MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | Neighborhood |
| BP | GO:0016485 | protein processing | IEP | Neighborhood |
| BP | GO:0016569 | covalent chromatin modification | IEP | Neighborhood |
| BP | GO:0016570 | histone modification | IEP | Neighborhood |
| BP | GO:0016571 | histone methylation | IEP | Neighborhood |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Neighborhood |
| MF | GO:0017056 | structural constituent of nuclear pore | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| BP | GO:0018022 | peptidyl-lysine methylation | IEP | Neighborhood |
| MF | GO:0018024 | histone-lysine N-methyltransferase activity | IEP | Neighborhood |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | Neighborhood |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| MF | GO:0030983 | mismatched DNA binding | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Neighborhood |
| MF | GO:0033170 | protein-DNA loading ATPase activity | IEP | Neighborhood |
| BP | GO:0033554 | cellular response to stress | IEP | Neighborhood |
| BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | Neighborhood |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Neighborhood |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0034968 | histone lysine methylation | IEP | Neighborhood |
| MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | Neighborhood |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| MF | GO:0042054 | histone methyltransferase activity | IEP | Neighborhood |
| MF | GO:0043015 | gamma-tubulin binding | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0044042 | glucan metabolic process | IEP | Neighborhood |
| BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
| BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | Neighborhood |
| CC | GO:0044422 | organelle part | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| CC | GO:0044428 | nuclear part | IEP | Neighborhood |
| CC | GO:0044446 | intracellular organelle part | IEP | Neighborhood |
| CC | GO:0044459 | plasma membrane part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| BP | GO:0046467 | membrane lipid biosynthetic process | IEP | Neighborhood |
| BP | GO:0046474 | glycerophospholipid biosynthetic process | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| MF | GO:0046527 | glucosyltransferase activity | IEP | Neighborhood |
| BP | GO:0051273 | beta-glucan metabolic process | IEP | Neighborhood |
| BP | GO:0051274 | beta-glucan biosynthetic process | IEP | Neighborhood |
| BP | GO:0051604 | protein maturation | IEP | Neighborhood |
| BP | GO:0051716 | cellular response to stimulus | IEP | Neighborhood |
| BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | Neighborhood |
| MF | GO:0097747 | RNA polymerase activity | IEP | Neighborhood |
| CC | GO:0098797 | plasma membrane protein complex | IEP | Neighborhood |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Neighborhood |
| CC | GO:1902494 | catalytic complex | IEP | Neighborhood |
| BP | GO:1903509 | liposaccharide metabolic process | IEP | Neighborhood |
| CC | GO:1990234 | transferase complex | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |