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  5. AT1G47980

AT1G47980


Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G62730.1); Has 169 Blast hits to 169 proteins in 41 species: Archae - 0; Bacteria - 68; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0000820 (Archaeplastida) Phylogenetic Tree(s): OG0000820_tree ,
OG_05_0000926 (LandPlants) Phylogenetic Tree(s): OG_05_0000926_tree ,
OG_06_0001333 (SeedPlants) Phylogenetic Tree(s): OG_06_0001333_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G47980
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00253560 evm_27.TU.AmTr_v1... Desiccation-related protein PCC13-62 OS=Craterostigma... 0.12 Archaeplastida
AMTR_s00016p00253590 evm_27.TU.AmTr_v1... Desiccation-related protein PCC13-62 OS=Craterostigma... 0.12 Archaeplastida
AMTR_s00106p00055220 evm_27.TU.AmTr_v1... Desiccation-related protein PCC13-62 OS=Craterostigma... 0.03 Archaeplastida
AT3G62730 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 Archaeplastida
GSVIVT01027969001 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.03 Archaeplastida
GSVIVT01035573001 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.06 Archaeplastida
Gb_11266 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.05 Archaeplastida
Gb_15806 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.05 Archaeplastida
Gb_19468 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.03 Archaeplastida
Gb_19469 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.04 Archaeplastida
Gb_32514 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.03 Archaeplastida
LOC_Os03g22470.1 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.02 Archaeplastida
LOC_Os04g33150.1 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.02 Archaeplastida
LOC_Os05g05920.1 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.14 Archaeplastida
MA_10431585g0010 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.05 Archaeplastida
MA_10432841g0010 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.04 Archaeplastida
MA_19739g0010 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.01 Archaeplastida
MA_276729g0010 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.04 Archaeplastida
MA_63089g0010 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.02 Archaeplastida
MA_6353194g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c7_6750V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c7_6790V3.1 No alias No annotation 0.02 Archaeplastida
Smo15031 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.03 Archaeplastida
Smo415476 No alias No description available 0.02 Archaeplastida
Solyc01g099530.3.1 No alias Pentatricopeptide repeat-containing protein At5g14770,... 0.16 Archaeplastida
Solyc01g099570.4.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Solyc01g099580.3.1 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.03 Archaeplastida
Solyc05g053350.3.1 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.06 Archaeplastida
Solyc09g014310.3.1 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.03 Archaeplastida
Zm00001e001638_P001 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.06 Archaeplastida
Zm00001e029735_P001 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.08 Archaeplastida
Zm00001e040816_P001 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000038 very long-chain fatty acid metabolic process IEP Neighborhood
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004044 amidophosphoribosyltransferase activity IEP Neighborhood
MF GO:0004467 long-chain fatty acid-CoA ligase activity IEP Neighborhood
MF GO:0004497 monooxygenase activity IEP Neighborhood
CC GO:0005788 endoplasmic reticulum lumen IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
BP GO:0008216 spermidine metabolic process IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0009113 purine nucleobase biosynthetic process IEP Neighborhood
BP GO:0009555 pollen development IEP Neighborhood
BP GO:0009556 microsporogenesis IEP Neighborhood
BP GO:0009698 phenylpropanoid metabolic process IEP Neighborhood
BP GO:0009699 phenylpropanoid biosynthetic process IEP Neighborhood
BP GO:0009820 alkaloid metabolic process IEP Neighborhood
BP GO:0009821 alkaloid biosynthetic process IEP Neighborhood
BP GO:0009943 adaxial/abaxial axis specification IEP Neighborhood
BP GO:0010152 pollen maturation IEP Neighborhood
BP GO:0010199 organ boundary specification between lateral organs and the meristem IEP Neighborhood
BP GO:0010208 pollen wall assembly IEP Neighborhood
BP GO:0010584 pollen exine formation IEP Neighborhood
BP GO:0010927 cellular component assembly involved in morphogenesis IEP Neighborhood
MF GO:0015271 outward rectifier potassium channel activity IEP Neighborhood
MF GO:0015645 fatty acid ligase activity IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016207 4-coumarate-CoA ligase activity IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016621 cinnamoyl-CoA reductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0016713 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
MF GO:0018685 alkane 1-monooxygenase activity IEP Neighborhood
MF GO:0019825 oxygen binding IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0030638 polyketide metabolic process IEP Neighborhood
BP GO:0030639 polyketide biosynthetic process IEP Neighborhood
MF GO:0031956 medium-chain fatty acid-CoA ligase activity IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
BP GO:0034293 sexual sporulation IEP Neighborhood
BP GO:0035337 fatty-acyl-CoA metabolic process IEP Neighborhood
BP GO:0035384 thioester biosynthetic process IEP Neighborhood
BP GO:0035445 borate transmembrane transport IEP Neighborhood
BP GO:0042335 cuticle development IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
BP GO:0043934 sporulation IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0046112 nucleobase biosynthetic process IEP Neighborhood
BP GO:0046713 borate transport IEP Neighborhood
MF GO:0046715 active borate transmembrane transporter activity IEP Neighborhood
BP GO:0046949 fatty-acyl-CoA biosynthetic process IEP Neighborhood
BP GO:0048229 gametophyte development IEP Neighborhood
BP GO:0048236 plant-type sporogenesis IEP Neighborhood
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Neighborhood
BP GO:0048859 formation of anatomical boundary IEP Neighborhood
MF GO:0050734 hydroxycinnamoyltransferase activity IEP Neighborhood
BP GO:0051321 meiotic cell cycle IEP Neighborhood
BP GO:0051791 medium-chain fatty acid metabolic process IEP Neighborhood
BP GO:0051792 medium-chain fatty acid biosynthetic process IEP Neighborhood
BP GO:0071616 acyl-CoA biosynthetic process IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
MF GO:0072532 tri-(feruloyl or hydroxyferuloyl) spermidine meta-hydroxylase activity IEP Neighborhood
MF GO:0072533 tri-(coumaroyl or caffeoyl) spermidine meta-hydroxylase activity IEP Neighborhood
MF GO:0072547 tricoumaroylspermidine meta-hydroxylase activity IEP Neighborhood
MF GO:0072548 dicoumaroyl monocaffeoyl spermidine meta-hydroxylase activity IEP Neighborhood
MF GO:0072549 monocoumaroyl dicaffeoyl spermidine meta-hydroxylase activity IEP Neighborhood
MF GO:0072550 triferuloylspermidine meta-hydroxylase activity IEP Neighborhood
MF GO:0072551 diferuloyl mono-(hydroxyferuloyl) spermidine meta-hydroxylase activity IEP Neighborhood
MF GO:0072552 monoferuloyl di-(hydroxyferuloyl) spermidine meta-hydroxylase activity IEP Neighborhood
MF GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity IEP Neighborhood
MF GO:0080030 methyl indole-3-acetate esterase activity IEP Neighborhood
MF GO:0080072 spermidine:sinapoyl CoA N-acyltransferase activity IEP Neighborhood
MF GO:0080073 spermidine:coumaroyl CoA N-acyltransferase activity IEP Neighborhood
MF GO:0080074 spermidine:caffeoyl CoA N-acyltransferase activity IEP Neighborhood
MF GO:0080075 spermidine:feruloyl CoA N-acyltransferase activity IEP Neighborhood
BP GO:0080088 spermidine hydroxycinnamate conjugate biosynthetic process IEP Neighborhood
BP GO:0080110 sporopollenin biosynthetic process IEP Neighborhood
MF GO:0090439 tetraketide alpha-pyrone synthase activity IEP Neighborhood
BP GO:0090691 formation of plant organ boundary IEP Neighborhood
BP GO:0098661 inorganic anion transmembrane transport IEP Neighborhood
BP GO:1900150 regulation of defense response to fungus IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!