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Aliases : evm_27.TU.AmTr_v1.0_scaffold00038.7
Description : RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.zf-HD transcription factor
Gene families : OG0000209 (Archaeplastida) Phylogenetic Tree(s): OG0000209_tree ,
OG_05_0000122 (LandPlants) Phylogenetic Tree(s): OG_05_0000122_tree ,
OG_06_0000088 (SeedPlants) Phylogenetic Tree(s): OG_06_0000088_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00038p00027320 | |
| Cluster | HCCA: Cluster_96 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00024p00085480 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.HB... | 0.06 | Archaeplastida | |
| AT1G14440 | AtHB31, ZHD4, HB31 | homeobox protein 31 | 0.07 | Archaeplastida | |
| AT1G14687 | AtHB32, HB32, ZHD14 | homeobox protein 32 | 0.02 | Archaeplastida | |
| AT1G75240 | AtHB33, ZHD5, HB33 | homeobox protein 33 | 0.06 | Archaeplastida | |
| AT2G02540 | ZHD3, HB21, ATHB21, ZFHD4 | homeobox protein 21 | 0.06 | Archaeplastida | |
| AT3G50890 | ZHD7, HB28, AtHB28 | homeobox protein 28 | 0.03 | Archaeplastida | |
| AT4G24660 | ATHB22, MEE68, ZHD2, HB22 | homeobox protein 22 | 0.02 | Archaeplastida | |
| AT5G15210 | ZHD8, ATHB30, ZFHD3, HB30 | homeobox protein 30 | 0.04 | Archaeplastida | |
| AT5G42780 | HB27, ZHD13, AtHB27 | homeobox protein 27 | 0.03 | Archaeplastida | |
| AT5G65410 | ZHD1, ZFHD2, HB25, ATHB25 | homeobox protein 25 | 0.06 | Archaeplastida | |
| GSVIVT01000250001 | No alias | RNA biosynthesis.transcriptional activation.HB... | 0.04 | Archaeplastida | |
| GSVIVT01000386001 | No alias | RNA biosynthesis.transcriptional activation.HB... | 0.03 | Archaeplastida | |
| GSVIVT01003614001 | No alias | RNA biosynthesis.transcriptional activation.HB... | 0.03 | Archaeplastida | |
| GSVIVT01009721001 | No alias | RNA biosynthesis.transcriptional activation.HB... | 0.02 | Archaeplastida | |
| GSVIVT01011413001 | No alias | RNA biosynthesis.transcriptional activation.HB... | 0.02 | Archaeplastida | |
| Gb_18045 | No alias | transcription factor (zf-HD) | 0.03 | Archaeplastida | |
| Gb_37393 | No alias | transcription factor (zf-HD) | 0.03 | Archaeplastida | |
| LOC_Os02g47770.1 | No alias | transcription factor (zf-HD) | 0.05 | Archaeplastida | |
| LOC_Os03g50920.1 | No alias | transcription factor (zf-HD) | 0.04 | Archaeplastida | |
| LOC_Os04g35500.1 | No alias | transcription factor (zf-HD) | 0.09 | Archaeplastida | |
| LOC_Os08g37400.1 | No alias | transcription factor (zf-HD) | 0.07 | Archaeplastida | |
| LOC_Os09g24810.1 | No alias | transcription factor (zf-HD) | 0.04 | Archaeplastida | |
| LOC_Os09g29130.1 | No alias | transcription factor (zf-HD) | 0.02 | Archaeplastida | |
| LOC_Os11g13930.1 | No alias | transcription factor (zf-HD) | 0.06 | Archaeplastida | |
| MA_10427932g0010 | No alias | transcription factor (zf-HD) | 0.03 | Archaeplastida | |
| Mp8g08190.1 | No alias | transcription factor (zf-HD) | 0.03 | Archaeplastida | |
| Pp3c19_20410V3.1 | No alias | homeobox protein 21 | 0.03 | Archaeplastida | |
| Pp3c1_15290V3.1 | No alias | homeobox protein 33 | 0.02 | Archaeplastida | |
| Pp3c22_9600V3.1 | No alias | homeobox protein 31 | 0.03 | Archaeplastida | |
| Pp3c2_21160V3.1 | No alias | homeobox protein 33 | 0.03 | Archaeplastida | |
| Pp3c7_15000V3.1 | No alias | homeobox protein 33 | 0.02 | Archaeplastida | |
| Smo38995 | No alias | RNA biosynthesis.transcriptional activation.HB... | 0.02 | Archaeplastida | |
| Smo59934 | No alias | RNA biosynthesis.transcriptional activation.HB... | 0.02 | Archaeplastida | |
| Solyc01g102980.3.1 | No alias | transcription factor (zf-HD) | 0.04 | Archaeplastida | |
| Solyc02g067320.3.1 | No alias | transcription factor (zf-HD) | 0.02 | Archaeplastida | |
| Solyc02g085160.1.1 | No alias | transcription factor (zf-HD) | 0.05 | Archaeplastida | |
| Solyc03g116070.1.1 | No alias | transcription factor (zf-HD) | 0.02 | Archaeplastida | |
| Solyc04g014260.2.1 | No alias | transcription factor (zf-HD) | 0.04 | Archaeplastida | |
| Solyc04g074990.3.1 | No alias | transcription factor (zf-HD) | 0.04 | Archaeplastida | |
| Solyc04g080490.4.1 | No alias | transcription factor (zf-HD) | 0.05 | Archaeplastida | |
| Solyc05g007580.1.1 | No alias | transcription factor (zf-HD) | 0.02 | Archaeplastida | |
| Zm00001e003837_P001 | No alias | transcription factor (zf-HD) | 0.03 | Archaeplastida | |
| Zm00001e008082_P001 | No alias | transcription factor (zf-HD) | 0.09 | Archaeplastida | |
| Zm00001e009830_P001 | No alias | transcription factor (zf-HD) | 0.05 | Archaeplastida | |
| Zm00001e015590_P001 | No alias | transcription factor (zf-HD) | 0.05 | Archaeplastida | |
| Zm00001e018364_P001 | No alias | transcription factor (zf-HD) | 0.09 | Archaeplastida | |
| Zm00001e021292_P003 | No alias | transcription factor (zf-HD) | 0.07 | Archaeplastida | |
| Zm00001e022486_P001 | No alias | transcription factor (zf-HD) | 0.08 | Archaeplastida | |
| Zm00001e023331_P001 | No alias | transcription factor (zf-HD) | 0.09 | Archaeplastida | |
| Zm00001e034119_P001 | No alias | transcription factor (zf-HD) | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
| MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
| MF | GO:0004521 | endoribonuclease activity | IEP | Neighborhood |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Neighborhood |
| MF | GO:0005215 | transporter activity | IEP | Neighborhood |
| MF | GO:0005506 | iron ion binding | IEP | Neighborhood |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006629 | lipid metabolic process | IEP | Neighborhood |
| BP | GO:0006631 | fatty acid metabolic process | IEP | Neighborhood |
| BP | GO:0006633 | fatty acid biosynthetic process | IEP | Neighborhood |
| BP | GO:0006694 | steroid biosynthetic process | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| BP | GO:0008152 | metabolic process | IEP | Neighborhood |
| BP | GO:0008202 | steroid metabolic process | IEP | Neighborhood |
| BP | GO:0008610 | lipid biosynthetic process | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| CC | GO:0016020 | membrane | IEP | Neighborhood |
| MF | GO:0016597 | amino acid binding | IEP | Neighborhood |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Neighborhood |
| MF | GO:0016706 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | IEP | Neighborhood |
| MF | GO:0016787 | hydrolase activity | IEP | Neighborhood |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Neighborhood |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Neighborhood |
| MF | GO:0016892 | endoribonuclease activity, producing 3'-phosphomonoesters | IEP | Neighborhood |
| MF | GO:0016894 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | Neighborhood |
| MF | GO:0033897 | ribonuclease T2 activity | IEP | Neighborhood |
| BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| MF | GO:0051213 | dioxygenase activity | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0055114 | oxidation-reduction process | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0072330 | monocarboxylic acid biosynthetic process | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006456 | ZF_HD_homeobox_Cys/His_dimer | 53 | 109 |
| No external refs found! |