1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01011589001

GSVIVT01011589001


Description : RNA biosynthesis.transcriptional activation.BBR/BPC transcription factor


Gene families : OG0001410 (Archaeplastida) Phylogenetic Tree(s): OG0001410_tree ,
OG_05_0000887 (LandPlants) Phylogenetic Tree(s): OG_05_0000887_tree ,
OG_06_0000941 (SeedPlants) Phylogenetic Tree(s): OG_06_0000941_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01011589001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00254090 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.BBR/BPC... 0.04 Archaeplastida
GSVIVT01009845001 No alias RNA biosynthesis.transcriptional activation.BBR/BPC... 0.02 Archaeplastida
GSVIVT01024162001 No alias RNA biosynthesis.transcriptional activation.BBR/BPC... 0.03 Archaeplastida
LOC_Os06g04010.2 No alias transcription factor (BBR/BPC) 0.02 Archaeplastida
LOC_Os10g02584.3 No alias transcription factor (BBR/BPC) 0.02 Archaeplastida
Solyc06g072370.3.1 No alias transcription factor (BBR/BPC) 0.02 Archaeplastida
Zm00001e036601_P001 No alias transcription factor (BBR/BPC) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
InterPro domains Description Start Stop
IPR010409 GAGA-bd_tscrpt_act 15 108
IPR010409 GAGA-bd_tscrpt_act 111 274
No external refs found!