GSVIVT01011650001

Description : RNA biosynthesis.transcriptional activation.ARR-B transcription factor

Gene families : OG0000192 (Archaeplastida) Phylogenetic Tree(s): OG0000192_tree ,
OG_05_0000364 (LandPlants) Phylogenetic Tree(s): OG_05_0000364_tree ,
OG_06_0000306 (SeedPlants) Phylogenetic Tree(s): OG_06_0000306_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01011650001
Cluster	HCCA: Cluster_56

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00208460	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.ARR-B...	0.04	Archaeplastida
AMTR_s00176p00045260	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.ARR-B...	0.04	Archaeplastida
AT3G16857	ARR1, RR1	response regulator 1	0.03	Archaeplastida
Gb_15884	No alias	B-type cytokinin ARR response activator. transcription...	0.05	Archaeplastida
Gb_27151	No alias	B-type cytokinin ARR response activator. transcription...	0.02	Archaeplastida
Gb_32182	No alias	B-type cytokinin ARR response activator. transcription...	0.03	Archaeplastida
LOC_Os02g55320.1	No alias	B-type cytokinin ARR response activator. transcription...	0.04	Archaeplastida
LOC_Os05g34110.1	No alias	Transcription factor MYBC1 OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_103946g0010	No alias	B-type cytokinin ARR response activator. transcription...	0.03	Archaeplastida
MA_3352g0010	No alias	component LUX of circadian clock Evening complex (EC)	0.03	Archaeplastida
MA_9051g0010	No alias	B-type cytokinin ARR response activator. transcription...	0.03	Archaeplastida
Mp4g20600.1	No alias	B-type cytokinin ARR response activator. transcription...	0.02	Archaeplastida
Pp3c23_7400V3.1	No alias	response regulator 2	0.03	Archaeplastida
Pp3c7_7640V3.1	No alias	response regulator 2	0.02	Archaeplastida
Pp3c9_14170V3.1	No alias	Homeodomain-like superfamily protein	0.06	Archaeplastida
Pp3c9_14240V3.1	No alias	Homeodomain-like superfamily protein	0.08	Archaeplastida
Solyc12g010330.2.1	No alias	B-type cytokinin ARR response activator. transcription...	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003682	chromatin binding	IEP	Neighborhood
MF	GO:0003712	transcription coregulator activity	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
BP	GO:0005984	disaccharide metabolic process	IEP	Neighborhood
BP	GO:0005991	trehalose metabolic process	IEP	Neighborhood
BP	GO:0005992	trehalose biosynthetic process	IEP	Neighborhood
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Neighborhood
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0009889	regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0010468	regulation of gene expression	IEP	Neighborhood
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Neighborhood
CC	GO:0016592	mediator complex	IEP	Neighborhood
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0031323	regulation of cellular metabolic process	IEP	Neighborhood
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Neighborhood
BP	GO:0046351	disaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0051252	regulation of RNA metabolic process	IEP	Neighborhood
BP	GO:0080090	regulation of primary metabolic process	IEP	Neighborhood
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001789	Sig_transdc_resp-reg_receiver	35	143
IPR001005	SANT/Myb	221	269

External Links

No external refs found!

GSVIVT01011650001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation