Description : RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.head module.MED17 component
Gene families : OG0004370 (Archaeplastida) Phylogenetic Tree(s): OG0004370_tree ,
OG_05_0004873 (LandPlants) Phylogenetic Tree(s): OG_05_0004873_tree ,
OG_06_0005483 (SeedPlants) Phylogenetic Tree(s): OG_06_0005483_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01015509001 | |
Cluster | HCCA: Cluster_233 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Solyc12g006650.2.1 | No alias | component MED17 of head module of MEDIATOR transcription... | 0.03 | Archaeplastida | |
Zm00001e025208_P001 | No alias | component MED17 of head module of MEDIATOR transcription... | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003712 | transcription coregulator activity | IEA | Interproscan |
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEA | Interproscan |
CC | GO:0016592 | mediator complex | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Neighborhood |
MF | GO:0005488 | binding | IEP | Neighborhood |
MF | GO:0005515 | protein binding | IEP | Neighborhood |
BP | GO:0008033 | tRNA processing | IEP | Neighborhood |
BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | Neighborhood |
MF | GO:0017150 | tRNA dihydrouridine synthase activity | IEP | Neighborhood |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Neighborhood |
BP | GO:0034470 | ncRNA processing | IEP | Neighborhood |
MF | GO:0042393 | histone binding | IEP | Neighborhood |
MF | GO:0097747 | RNA polymerase activity | IEP | Neighborhood |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR019313 | Mediator_Med17 | 72 | 311 |
No external refs found! |