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  5. GSVIVT01016720001

GSVIVT01016720001


Description : Oligouridylate-binding protein 1B OS=Arabidopsis thaliana


Gene families : OG0002141 (Archaeplastida) Phylogenetic Tree(s): OG0002141_tree ,
OG_05_0002492 (LandPlants) Phylogenetic Tree(s): OG_05_0002492_tree ,
OG_06_0002145 (SeedPlants) Phylogenetic Tree(s): OG_06_0002145_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016720001
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00204100 evm_27.TU.AmTr_v1... Oligouridylate-binding protein 1 OS=Nicotiana plumbaginifolia 0.03 Archaeplastida
Cpa|evm.model.tig00001181.9 No alias Oligouridylate-binding protein 1 OS=Nicotiana plumbaginifolia 0.02 Archaeplastida
Zm00001e003593_P002 No alias mRNA-binding regulatory factor (UBP1) 0.04 Archaeplastida
Zm00001e021914_P002 No alias mRNA-binding regulatory factor (UBP1) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
CC GO:0030119 AP-type membrane coat adaptor complex IEP Neighborhood
CC GO:0030131 clathrin adaptor complex IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
MF GO:0031369 translation initiation factor binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0070569 uridylyltransferase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 42 108
IPR000504 RRM_dom 127 197
IPR000504 RRM_dom 248 312
No external refs found!