GSVIVT01017070001

Description : Multi-process regulation.Rop GTPase regulatory system.RopGEF guanine nucleotide exchange activities.PRONE-type exchange factor

Gene families : OG0000251 (Archaeplastida) Phylogenetic Tree(s): OG0000251_tree ,
OG_05_0001518 (LandPlants) Phylogenetic Tree(s): OG_05_0001518_tree ,
OG_06_0000896 (SeedPlants) Phylogenetic Tree(s): OG_06_0000896_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01017070001
Cluster	HCCA: Cluster_82

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00182400	evm_27.TU.AmTr_v1...	Multi-process regulation.Rop GTPase regulatory...	0.02	Archaeplastida
AMTR_s00109p00064220	evm_27.TU.AmTr_v1...	Multi-process regulation.Rop GTPase regulatory...	0.12	Archaeplastida
AT1G52240	ATROPGEF11,...	RHO guanyl-nucleotide exchange factor 11	0.06	Archaeplastida
AT1G79860	ROPGEF12, MEE64,...	RHO guanyl-nucleotide exchange factor 12	0.11	Archaeplastida
AT2G45890	ATROPGEF4, RHS11, ROPGEF4	RHO guanyl-nucleotide exchange factor 4	0.09	Archaeplastida
AT3G16130	PIRF2, ROPGEF13,...	RHO guanyl-nucleotide exchange factor 13	0.05	Archaeplastida
AT3G24620	ROPGEF8, ATROPGEF8	RHO guanyl-nucleotide exchange factor 8	0.08	Archaeplastida
AT4G13240	ATROPGEF9, ROPGEF9	RHO guanyl-nucleotide exchange factor 9	0.1	Archaeplastida
AT5G02010	ROPGEF7, ATROPGEF7	RHO guanyl-nucleotide exchange factor 7	0.04	Archaeplastida
AT5G19560	ATROPGEF10, ROPGEF10	ROP uanine nucleotide exchange factor 10	0.02	Archaeplastida
Gb_14425	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.02	Archaeplastida
Gb_24552	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.03	Archaeplastida
Gb_34956	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.02	Archaeplastida
LOC_Os01g48410.1	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.12	Archaeplastida
LOC_Os01g55520.1	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.09	Archaeplastida
LOC_Os02g17240.1	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.11	Archaeplastida
LOC_Os04g47170.1	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.05	Archaeplastida
LOC_Os05g38000.1	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.04	Archaeplastida
LOC_Os05g48640.1	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.05	Archaeplastida
LOC_Os09g37270.1	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.02	Archaeplastida
LOC_Os10g40270.1	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.03	Archaeplastida
MA_106710g0030	No alias	Cytochrome P450 94C1 OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_2791g0010	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.03	Archaeplastida
Pp3c2_4460V3.1	No alias	RHO guanyl-nucleotide exchange factor 7	0.02	Archaeplastida
Solyc01g094610.4.1	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.03	Archaeplastida
Solyc03g120650.4.1	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.1	Archaeplastida
Solyc07g032730.4.1	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.03	Archaeplastida
Solyc12g007150.3.1	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.04	Archaeplastida
Solyc12g044270.2.1	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.08	Archaeplastida
Zm00001e010284_P002	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.03	Archaeplastida
Zm00001e014205_P002	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.09	Archaeplastida
Zm00001e019750_P001	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.09	Archaeplastida
Zm00001e020182_P002	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.1	Archaeplastida
Zm00001e024760_P001	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.09	Archaeplastida
Zm00001e026517_P004	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.1	Archaeplastida
Zm00001e034952_P003	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005085	guanyl-nucleotide exchange factor activity	None	Extended
MF	GO:0005088	Ras guanyl-nucleotide exchange factor activity	None	Extended
MF	GO:0005089	Rho guanyl-nucleotide exchange factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0017016	Ras GTPase binding	None	Extended
MF	GO:0017048	Rho GTPase binding	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
MF	GO:0031267	small GTPase binding	None	Extended
MF	GO:0051020	GTPase binding	None	Extended
MF	GO:0098772	molecular function regulator	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	IEP	Neighborhood
MF	GO:0003779	actin binding	IEP	Neighborhood
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
MF	GO:0004650	polygalacturonase activity	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0005215	transporter activity	IEP	Neighborhood
CC	GO:0005575	cellular_component	IEP	Neighborhood
BP	GO:0005975	carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006811	ion transport	IEP	Neighborhood
BP	GO:0006812	cation transport	IEP	Neighborhood
BP	GO:0008150	biological_process	IEP	Neighborhood
MF	GO:0008324	cation transmembrane transporter activity	IEP	Neighborhood
BP	GO:0009790	embryo development	IEP	Neighborhood
BP	GO:0009793	embryo development ending in seed dormancy	IEP	Neighborhood
BP	GO:0010215	cellulose microfibril organization	IEP	Neighborhood
MF	GO:0015075	ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015077	monovalent inorganic cation transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015078	proton transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015297	antiporter activity	IEP	Neighborhood
MF	GO:0015298	solute:cation antiporter activity	IEP	Neighborhood
MF	GO:0015299	solute:proton antiporter activity	IEP	Neighborhood
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Neighborhood
CC	GO:0016021	integral component of membrane	IEP	Neighborhood
BP	GO:0016043	cellular component organization	IEP	Neighborhood
BP	GO:0016049	cell growth	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
CC	GO:0016469	proton-transporting two-sector ATPase complex	IEP	Neighborhood
CC	GO:0016471	vacuolar proton-transporting V-type ATPase complex	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
MF	GO:0016829	lyase activity	IEP	Neighborhood
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Neighborhood
MF	GO:0016837	carbon-oxygen lyase activity, acting on polysaccharides	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
MF	GO:0022804	active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0022857	transmembrane transporter activity	IEP	Neighborhood
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	Neighborhood
BP	GO:0030198	extracellular matrix organization	IEP	Neighborhood
MF	GO:0030570	pectate lyase activity	IEP	Neighborhood
MF	GO:0030599	pectinesterase activity	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
CC	GO:0031225	anchored component of membrane	IEP	Neighborhood
CC	GO:0033176	proton-transporting V-type ATPase complex	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
BP	GO:0040007	growth	IEP	Neighborhood
BP	GO:0042545	cell wall modification	IEP	Neighborhood
BP	GO:0043062	extracellular structure organization	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
BP	GO:0044238	primary metabolic process	IEP	Neighborhood
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
CC	GO:0044425	membrane part	IEP	Neighborhood
CC	GO:0044437	vacuolar part	IEP	Neighborhood
BP	GO:0045229	external encapsulating structure organization	IEP	Neighborhood
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Neighborhood
BP	GO:0055085	transmembrane transport	IEP	Neighborhood
BP	GO:0071554	cell wall organization or biogenesis	IEP	Neighborhood
BP	GO:0071555	cell wall organization	IEP	Neighborhood
BP	GO:0071704	organic substance metabolic process	IEP	Neighborhood
BP	GO:0071840	cellular component organization or biogenesis	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR005512	PRONE_dom	1	339

External Links

No external refs found!

GSVIVT01017070001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation