Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.GATA transcription factor
Gene families : OG0000094 (Archaeplastida) Phylogenetic Tree(s): OG0000094_tree ,
OG_05_0000055 (LandPlants) Phylogenetic Tree(s): OG_05_0000055_tree ,
OG_06_0000244 (SeedPlants) Phylogenetic Tree(s): OG_06_0000244_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01018833001 | |
Cluster | HCCA: Cluster_175 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00011p00253850 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.C2C2... | 0.02 | Archaeplastida | |
AMTR_s00017p00242860 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.C2C2... | 0.03 | Archaeplastida | |
AMTR_s00056p00080350 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.C2C2... | 0.04 | Archaeplastida | |
AMTR_s00106p00136770 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.C2C2... | 0.02 | Archaeplastida | |
AT3G54810 | BME3-ZF, BME3, GATA8 | Plant-specific GATA-type zinc finger transcription... | 0.06 | Archaeplastida | |
AT3G60530 | GATA4 | GATA transcription factor 4 | 0.02 | Archaeplastida | |
AT5G66320 | GATA5 | GATA transcription factor 5 | 0.03 | Archaeplastida | |
Cre01.g025050 | No alias | RNA biosynthesis.transcriptional activation.C2C2... | 0.02 | Archaeplastida | |
GSVIVT01035614001 | No alias | RNA biosynthesis.transcriptional activation.C2C2... | 0.03 | Archaeplastida | |
Gb_25568 | No alias | transcription factor (GATA) | 0.03 | Archaeplastida | |
Gb_34949 | No alias | no hits & (original description: none) | 0.05 | Archaeplastida | |
LOC_Os02g12790.1 | No alias | transcription factor (GATA) | 0.05 | Archaeplastida | |
LOC_Os02g56250.1 | No alias | transcription factor (GATA) | 0.02 | Archaeplastida | |
LOC_Os06g37450.1 | No alias | transcription factor (GATA) | 0.02 | Archaeplastida | |
LOC_Os10g40810.1 | No alias | transcription factor (GATA) | 0.02 | Archaeplastida | |
MA_44185g0010 | No alias | transcription factor (GATA) | 0.02 | Archaeplastida | |
MA_70991g0010 | No alias | no hits & (original description: none) | 0.05 | Archaeplastida | |
Pp3c20_22670V3.1 | No alias | GATA transcription factor 9 | 0.03 | Archaeplastida | |
Solyc04g015360.3.1 | No alias | transcription factor (GATA) | 0.02 | Archaeplastida | |
Solyc05g053500.4.1 | No alias | transcription factor (GATA) | 0.05 | Archaeplastida | |
Solyc05g056120.3.1 | No alias | transcription factor (GATA) | 0.02 | Archaeplastida | |
Solyc06g075140.3.1 | No alias | transcription factor (GATA) | 0.03 | Archaeplastida | |
Zm00001e005940_P001 | No alias | transcription factor (GATA) | 0.02 | Archaeplastida | |
Zm00001e016165_P001 | No alias | transcription factor (GATA) | 0.02 | Archaeplastida | |
Zm00001e026256_P001 | No alias | transcription factor (GATA) | 0.03 | Archaeplastida | |
Zm00001e027439_P001 | No alias | transcription factor (GATA) | 0.03 | Archaeplastida | |
Zm00001e037876_P002 | No alias | transcription factor (GATA) | 0.02 | Archaeplastida | |
Zm00001e039468_P001 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
MF | GO:0043565 | sequence-specific DNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003712 | transcription coregulator activity | IEP | Neighborhood |
MF | GO:0005215 | transporter activity | IEP | Neighborhood |
CC | GO:0005575 | cellular_component | IEP | Neighborhood |
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Neighborhood |
BP | GO:0006810 | transport | IEP | Neighborhood |
MF | GO:0015267 | channel activity | IEP | Neighborhood |
CC | GO:0016020 | membrane | IEP | Neighborhood |
CC | GO:0016592 | mediator complex | IEP | Neighborhood |
MF | GO:0022803 | passive transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0022857 | transmembrane transporter activity | IEP | Neighborhood |
CC | GO:0044428 | nuclear part | IEP | Neighborhood |
CC | GO:0044451 | nucleoplasm part | IEP | Neighborhood |
BP | GO:0051234 | establishment of localization | IEP | Neighborhood |
BP | GO:0055085 | transmembrane transport | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000679 | Znf_GATA | 224 | 258 |
No external refs found! |