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  5. GSVIVT01019733001

GSVIVT01019733001


Description : Solute transport.carrier-mediated transport.IT superfamily.putative silicon efflux transporter (LSI2-type)


Gene families : OG0002577 (Archaeplastida) Phylogenetic Tree(s): OG0002577_tree ,
OG_05_0001949 (LandPlants) Phylogenetic Tree(s): OG_05_0001949_tree ,
OG_06_0001480 (SeedPlants) Phylogenetic Tree(s): OG_06_0001480_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01019733001
Cluster HCCA: Cluster_188

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00225570 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At3g09030... 0.03 Archaeplastida
Gb_07324 No alias BTB/POZ domain-containing protein At5g41330... 0.02 Archaeplastida
Gb_10026 No alias BTB/POZ domain-containing protein At5g41330... 0.04 Archaeplastida
Gb_10027 No alias BTB/POZ domain-containing protein At5g41330... 0.03 Archaeplastida
Gb_35424 No alias BTB/POZ domain-containing protein At3g09030... 0.03 Archaeplastida
MA_161562g0010 No alias BTB/POZ domain-containing protein At5g41330... 0.07 Archaeplastida
MA_201277g0010 No alias BTB/POZ domain-containing protein At3g09030... 0.06 Archaeplastida
Solyc08g081230.1.1 No alias BTB/POZ domain-containing protein At5g41330... 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0051260 protein homooligomerization IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004888 transmembrane signaling receptor activity IEP Neighborhood
MF GO:0004970 ionotropic glutamate receptor activity IEP Neighborhood
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
MF GO:0008066 glutamate receptor activity IEP Neighborhood
MF GO:0008198 ferrous iron binding IEP Neighborhood
MF GO:0008375 acetylglucosaminyltransferase activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
MF GO:0009916 alternative oxidase activity IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0022824 transmitter-gated ion channel activity IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022835 transmitter-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
MF GO:0030594 neurotransmitter receptor activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Neighborhood
MF GO:0038023 signaling receptor activity IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
MF GO:0060089 molecular transducer activity IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004680 Cit_transptr-like_dom 591 726
IPR003131 T1-type_BTB 39 86
No external refs found!