Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.NOB1 endonuclease
Gene families : OG0004736 (Archaeplastida) Phylogenetic Tree(s): OG0004736_tree ,
OG_05_0005067 (LandPlants) Phylogenetic Tree(s): OG_05_0005067_tree ,
OG_06_0005489 (SeedPlants) Phylogenetic Tree(s): OG_06_0005489_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01019776001 | |
Cluster | HCCA: Cluster_44 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00110p00064100 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.08 | Archaeplastida | |
AT5G41190 | No alias | CONTAINS InterPro DOMAIN/s: Nin one binding (NOB1)... | 0.09 | Archaeplastida | |
Cpa|evm.model.tig00020964.11 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.01 | Archaeplastida | |
Cre01.g031750 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.14 | Archaeplastida | |
Gb_33378 | No alias | NOB1 pre-rRNA processing endonuclease involved in ITS1... | 0.09 | Archaeplastida | |
LOC_Os02g02360.1 | No alias | NOB1 pre-rRNA processing endonuclease involved in ITS1... | 0.12 | Archaeplastida | |
Mp1g16460.1 | No alias | NOB1 pre-rRNA processing endonuclease involved in ITS1... | 0.1 | Archaeplastida | |
Pp3c2_34320V3.1 | No alias | No annotation | 0.08 | Archaeplastida | |
Solyc08g007990.3.1 | No alias | NOB1 pre-rRNA processing endonuclease involved in ITS1... | 0.05 | Archaeplastida | |
Zm00001e013450_P001 | No alias | NOB1 pre-rRNA processing endonuclease involved in ITS1... | 0.03 | Archaeplastida | |
Zm00001e025376_P003 | No alias | NOB1 pre-rRNA processing endonuclease involved in ITS1... | 0.06 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
BP | GO:0001522 | pseudouridine synthesis | IEP | Neighborhood |
MF | GO:0001882 | nucleoside binding | IEP | Neighborhood |
MF | GO:0001883 | purine nucleoside binding | IEP | Neighborhood |
MF | GO:0003674 | molecular_function | IEP | Neighborhood |
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0003697 | single-stranded DNA binding | IEP | Neighborhood |
MF | GO:0003723 | RNA binding | IEP | Neighborhood |
MF | GO:0003724 | RNA helicase activity | IEP | Neighborhood |
MF | GO:0003743 | translation initiation factor activity | IEP | Neighborhood |
MF | GO:0004004 | ATP-dependent RNA helicase activity | IEP | Neighborhood |
MF | GO:0004386 | helicase activity | IEP | Neighborhood |
MF | GO:0005488 | binding | IEP | Neighborhood |
MF | GO:0005515 | protein binding | IEP | Neighborhood |
MF | GO:0005524 | ATP binding | IEP | Neighborhood |
MF | GO:0005525 | GTP binding | IEP | Neighborhood |
CC | GO:0005730 | nucleolus | IEP | Neighborhood |
CC | GO:0005737 | cytoplasm | IEP | Neighborhood |
CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | Neighborhood |
BP | GO:0006413 | translational initiation | IEP | Neighborhood |
MF | GO:0008026 | ATP-dependent helicase activity | IEP | Neighborhood |
MF | GO:0008134 | transcription factor binding | IEP | Neighborhood |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | Neighborhood |
MF | GO:0008144 | drug binding | IEP | Neighborhood |
MF | GO:0008168 | methyltransferase activity | IEP | Neighborhood |
MF | GO:0008186 | RNA-dependent ATPase activity | IEP | Neighborhood |
BP | GO:0016485 | protein processing | IEP | Neighborhood |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Neighborhood |
MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Neighborhood |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Neighborhood |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
MF | GO:0032549 | ribonucleoside binding | IEP | Neighborhood |
MF | GO:0032550 | purine ribonucleoside binding | IEP | Neighborhood |
MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Neighborhood |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
BP | GO:0042254 | ribosome biogenesis | IEP | Neighborhood |
MF | GO:0043167 | ion binding | IEP | Neighborhood |
MF | GO:0043168 | anion binding | IEP | Neighborhood |
BP | GO:0044085 | cellular component biogenesis | IEP | Neighborhood |
BP | GO:0051604 | protein maturation | IEP | Neighborhood |
MF | GO:0070035 | purine NTP-dependent helicase activity | IEP | Neighborhood |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | Neighborhood |
MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
No external refs found! |