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  5. GSVIVT01020688001

GSVIVT01020688001


Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG0000757 (Archaeplastida) Phylogenetic Tree(s): OG0000757_tree ,
OG_05_0000493 (LandPlants) Phylogenetic Tree(s): OG_05_0000493_tree ,
OG_06_0000486 (SeedPlants) Phylogenetic Tree(s): OG_06_0000486_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01020688001
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00144270 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AMTR_s00101p00150740 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
AT1G68810 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT2G40200 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.08 Archaeplastida
AT2G41130 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 Archaeplastida
AT3G25710 BHLH32, ATAIG1, TMO5 basic helix-loop-helix 32 0.04 Archaeplastida
LOC_Os01g11910.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os03g15440.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os08g33590.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
MA_132680g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc02g076920.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc03g095980.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc04g006990.3.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Solyc04g076240.3.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Solyc05g009880.3.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Solyc10g078380.2.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e001119_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e006132_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e009972_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e016455_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e016835_P001 No alias transcription factor (bHLH) 0.07 Archaeplastida
Zm00001e022445_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e034395_P001 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e038535_P001 No alias transcription factor (bHLH) 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003713 transcription coactivator activity IEP Neighborhood
MF GO:0005319 lipid transporter activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008378 galactosyltransferase activity IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
BP GO:0120009 intermembrane lipid transfer IEP Neighborhood
MF GO:0120013 intermembrane lipid transfer activity IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 6 52
No external refs found!