GSVIVT01021264001


Description : Protein STICHEL-like 3 OS=Arabidopsis thaliana


Gene families : OG0000633 (Archaeplastida) Phylogenetic Tree(s): OG0000633_tree ,
OG_05_0000427 (LandPlants) Phylogenetic Tree(s): OG_05_0000427_tree ,
OG_06_0003829 (SeedPlants) Phylogenetic Tree(s): OG_06_0003829_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01021264001
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
AT2G02480 STI AAA-type ATPase family protein 0.03 Archaeplastida
Gb_40211 No alias Protein STICHEL OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os08g02670.1 No alias Protein STICHEL-like 2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os12g10670.1 No alias Protein STICHEL OS=Arabidopsis thaliana... 0.06 Archaeplastida
LOC_Os12g19180.1 No alias Protein STICHEL-like 2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_49149g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c9_18380V3.1 No alias AAA-type ATPase family protein 0.02 Archaeplastida
Solyc01g102810.3.1 No alias Protein STICHEL OS=Arabidopsis thaliana... 0.08 Archaeplastida
Solyc02g072090.2.1 No alias Protein STICHEL-like 3 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Zm00001e007784_P001 No alias Protein STICHEL-like 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e019639_P005 No alias Protein STICHEL OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e019906_P002 No alias Protein STICHEL-like 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e032180_P001 No alias Protein STICHEL-like 3 OS=Arabidopsis thaliana... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0003917 DNA topoisomerase type I activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR022754 DNA_pol_III_gamma-3 499 618
No external refs found!