Description : Protein STICHEL-like 3 OS=Arabidopsis thaliana
Gene families : OG0000633 (Archaeplastida) Phylogenetic Tree(s): OG0000633_tree ,
OG_05_0000427 (LandPlants) Phylogenetic Tree(s): OG_05_0000427_tree ,
OG_06_0003829 (SeedPlants) Phylogenetic Tree(s): OG_06_0003829_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01021264001 | |
Cluster | HCCA: Cluster_123 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT2G02480 | STI | AAA-type ATPase family protein | 0.03 | Archaeplastida | |
Gb_40211 | No alias | Protein STICHEL OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
LOC_Os08g02670.1 | No alias | Protein STICHEL-like 2 OS=Arabidopsis thaliana... | 0.04 | Archaeplastida | |
LOC_Os12g10670.1 | No alias | Protein STICHEL OS=Arabidopsis thaliana... | 0.06 | Archaeplastida | |
LOC_Os12g19180.1 | No alias | Protein STICHEL-like 2 OS=Arabidopsis thaliana... | 0.04 | Archaeplastida | |
MA_49149g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
Pp3c9_18380V3.1 | No alias | AAA-type ATPase family protein | 0.02 | Archaeplastida | |
Solyc01g102810.3.1 | No alias | Protein STICHEL OS=Arabidopsis thaliana... | 0.08 | Archaeplastida | |
Solyc02g072090.2.1 | No alias | Protein STICHEL-like 3 OS=Arabidopsis thaliana... | 0.06 | Archaeplastida | |
Zm00001e007784_P001 | No alias | Protein STICHEL-like 2 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
Zm00001e019639_P005 | No alias | Protein STICHEL OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
Zm00001e019906_P002 | No alias | Protein STICHEL-like 3 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
Zm00001e032180_P001 | No alias | Protein STICHEL-like 3 OS=Arabidopsis thaliana... | 0.05 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003887 | DNA-directed DNA polymerase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0003677 | DNA binding | IEP | Neighborhood |
MF | GO:0003905 | alkylbase DNA N-glycosylase activity | IEP | Neighborhood |
MF | GO:0003916 | DNA topoisomerase activity | IEP | Neighborhood |
MF | GO:0003917 | DNA topoisomerase type I activity | IEP | Neighborhood |
MF | GO:0004222 | metalloendopeptidase activity | IEP | Neighborhood |
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Neighborhood |
MF | GO:0005085 | guanyl-nucleotide exchange factor activity | IEP | Neighborhood |
MF | GO:0005088 | Ras guanyl-nucleotide exchange factor activity | IEP | Neighborhood |
MF | GO:0005089 | Rho guanyl-nucleotide exchange factor activity | IEP | Neighborhood |
MF | GO:0005515 | protein binding | IEP | Neighborhood |
CC | GO:0005694 | chromosome | IEP | Neighborhood |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
BP | GO:0006265 | DNA topological change | IEP | Neighborhood |
BP | GO:0006281 | DNA repair | IEP | Neighborhood |
BP | GO:0006284 | base-excision repair | IEP | Neighborhood |
BP | GO:0006298 | mismatch repair | IEP | Neighborhood |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Neighborhood |
MF | GO:0008725 | DNA-3-methyladenine glycosylase activity | IEP | Neighborhood |
BP | GO:0009892 | negative regulation of metabolic process | IEP | Neighborhood |
BP | GO:0009987 | cellular process | IEP | Neighborhood |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0010629 | negative regulation of gene expression | IEP | Neighborhood |
BP | GO:0016458 | gene silencing | IEP | Neighborhood |
MF | GO:0016787 | hydrolase activity | IEP | Neighborhood |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Neighborhood |
MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | Neighborhood |
MF | GO:0017016 | Ras GTPase binding | IEP | Neighborhood |
MF | GO:0017048 | Rho GTPase binding | IEP | Neighborhood |
MF | GO:0019104 | DNA N-glycosylase activity | IEP | Neighborhood |
MF | GO:0030983 | mismatched DNA binding | IEP | Neighborhood |
BP | GO:0031047 | gene silencing by RNA | IEP | Neighborhood |
MF | GO:0031267 | small GTPase binding | IEP | Neighborhood |
BP | GO:0033554 | cellular response to stress | IEP | Neighborhood |
BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
MF | GO:0043733 | DNA-3-methylbase glycosylase activity | IEP | Neighborhood |
BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
BP | GO:0048519 | negative regulation of biological process | IEP | Neighborhood |
MF | GO:0051020 | GTPase binding | IEP | Neighborhood |
BP | GO:0051276 | chromosome organization | IEP | Neighborhood |
BP | GO:0051716 | cellular response to stimulus | IEP | Neighborhood |
BP | GO:0071103 | DNA conformation change | IEP | Neighborhood |
BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR022754 | DNA_pol_III_gamma-3 | 499 | 618 |
No external refs found! |