GSVIVT01021798001

Description : Cell wall.hemicellulose.heteromannan.synthesis.mannan synthase activities.CSLD-type mannan synthase

Gene families : OG0001034 (Archaeplastida) Phylogenetic Tree(s): OG0001034_tree ,
OG_05_0000623 (LandPlants) Phylogenetic Tree(s): OG_05_0000623_tree ,
OG_06_0000677 (SeedPlants) Phylogenetic Tree(s): OG_06_0000677_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01021798001
Cluster	HCCA: Cluster_82

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00246190	evm_27.TU.AmTr_v1...	Cell wall.hemicellulose.heteromannan.synthesis.mannan...	0.13	Archaeplastida
AMTR_s00022p00129900	evm_27.TU.AmTr_v1...	Cell wall.hemicellulose.heteromannan.synthesis.mannan...	0.14	Archaeplastida
AT2G33100	CSLD1, ATCSLD1	cellulose synthase-like D1	0.09	Archaeplastida
AT3G03050	ATCSLD3, KJK, CSLD3	cellulose synthase-like D3	0.02	Archaeplastida
AT4G38190	ATCSLD4, CSLD4	cellulose synthase like D4	0.12	Archaeplastida
AT5G16910	ATCSLD2, CSLD2	cellulose-synthase like D2	0.03	Archaeplastida
Gb_02801	No alias	mannan synthase (CSLD)	0.03	Archaeplastida
Gb_39671	No alias	mannan synthase (CSLD)	0.03	Archaeplastida
LOC_Os06g02180.1	No alias	mannan synthase (CSLD)	0.04	Archaeplastida
LOC_Os06g22980.1	No alias	mannan synthase (CSLD)	0.12	Archaeplastida
LOC_Os08g25710.1	No alias	mannan synthase (CSLD)	0.14	Archaeplastida
LOC_Os10g42750.1	No alias	mannan synthase (CSLD)	0.04	Archaeplastida
Mp2g05640.1	No alias	mannan synthase (CSLD)	0.05	Archaeplastida
Mp2g05660.1	No alias	catalytic component CesA of cellulose synthase complex....	0.06	Archaeplastida
Mp2g05670.1	No alias	catalytic component CesA of cellulose synthase complex....	0.03	Archaeplastida
Mp5g24530.1	No alias	mannan synthase (CSLD)	0.02	Archaeplastida
Mp5g24550.1	No alias	mannan synthase (CSLD)	0.02	Archaeplastida
Pp3c14_26100V3.1	No alias	cellulose synthase-like D3	0.07	Archaeplastida
Pp3c17_22380V3.1	No alias	cellulose synthase-like D3	0.07	Archaeplastida
Pp3c1_41250V3.1	No alias	cellulose synthase-like D3	0.08	Archaeplastida
Pp3c1_41400V3.1	No alias	cellulose synthase-like D3	0.03	Archaeplastida
Pp3c2_1280V3.1	No alias	cellulose synthase-like D3	0.04	Archaeplastida
Pp3c2_1330V3.1	No alias	cellulose synthase-like D3	0.02	Archaeplastida
Pp3c6_4064V3.1	No alias	cellulose synthase-like D3	0.02	Archaeplastida
Solyc01g067520.3.1	No alias	mannan synthase (CSLD)	0.04	Archaeplastida
Solyc03g097050.3.1	No alias	mannan synthase (CSLD)	0.04	Archaeplastida
Solyc05g053560.4.1	No alias	mannan synthase (CSLD)	0.04	Archaeplastida
Solyc08g005280.2.1	No alias	mannan synthase (CSLD)	0.01	Archaeplastida
Solyc10g074620.3.1	No alias	mannan synthase (CSLD)	0.06	Archaeplastida
Zm00001e002486_P001	No alias	mannan synthase (CSLD)	0.04	Archaeplastida
Zm00001e004304_P002	No alias	mannan synthase (CSLD)	0.05	Archaeplastida
Zm00001e036680_P001	No alias	mannan synthase (CSLD)	0.03	Archaeplastida
Zm00001e037015_P002	No alias	mannan synthase (CSLD)	0.07	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	transferase activity, transferring glycosyl groups	None	Extended
MF	GO:0016758	transferase activity, transferring hexosyl groups	None	Extended
MF	GO:0016759	cellulose synthase activity	None	Extended
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEA	Interproscan
BP	GO:0030243	cellulose metabolic process	None	Extended
BP	GO:0030244	cellulose biosynthetic process	IEA	Interproscan
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	IEP	Neighborhood
MF	GO:0003779	actin binding	IEP	Neighborhood
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
MF	GO:0004650	polygalacturonase activity	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005088	Ras guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005089	Rho guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005215	transporter activity	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006811	ion transport	IEP	Neighborhood
BP	GO:0006812	cation transport	IEP	Neighborhood
MF	GO:0008324	cation transmembrane transporter activity	IEP	Neighborhood
BP	GO:0009790	embryo development	IEP	Neighborhood
BP	GO:0009793	embryo development ending in seed dormancy	IEP	Neighborhood
BP	GO:0010215	cellulose microfibril organization	IEP	Neighborhood
MF	GO:0015075	ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015077	monovalent inorganic cation transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015078	proton transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015297	antiporter activity	IEP	Neighborhood
MF	GO:0015298	solute:cation antiporter activity	IEP	Neighborhood
MF	GO:0015299	solute:proton antiporter activity	IEP	Neighborhood
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Neighborhood
CC	GO:0016021	integral component of membrane	IEP	Neighborhood
BP	GO:0016043	cellular component organization	IEP	Neighborhood
BP	GO:0016049	cell growth	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
CC	GO:0016469	proton-transporting two-sector ATPase complex	IEP	Neighborhood
CC	GO:0016471	vacuolar proton-transporting V-type ATPase complex	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
MF	GO:0016829	lyase activity	IEP	Neighborhood
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Neighborhood
MF	GO:0016837	carbon-oxygen lyase activity, acting on polysaccharides	IEP	Neighborhood
MF	GO:0017016	Ras GTPase binding	IEP	Neighborhood
MF	GO:0017048	Rho GTPase binding	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
MF	GO:0019899	enzyme binding	IEP	Neighborhood
MF	GO:0022804	active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0022857	transmembrane transporter activity	IEP	Neighborhood
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	Neighborhood
BP	GO:0030198	extracellular matrix organization	IEP	Neighborhood
MF	GO:0030570	pectate lyase activity	IEP	Neighborhood
MF	GO:0030599	pectinesterase activity	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
CC	GO:0031225	anchored component of membrane	IEP	Neighborhood
MF	GO:0031267	small GTPase binding	IEP	Neighborhood
CC	GO:0033176	proton-transporting V-type ATPase complex	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
BP	GO:0040007	growth	IEP	Neighborhood
BP	GO:0042545	cell wall modification	IEP	Neighborhood
BP	GO:0043062	extracellular structure organization	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
CC	GO:0044425	membrane part	IEP	Neighborhood
CC	GO:0044437	vacuolar part	IEP	Neighborhood
BP	GO:0045229	external encapsulating structure organization	IEP	Neighborhood
MF	GO:0051020	GTPase binding	IEP	Neighborhood
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Neighborhood
BP	GO:0055085	transmembrane transport	IEP	Neighborhood
BP	GO:0071554	cell wall organization or biogenesis	IEP	Neighborhood
BP	GO:0071555	cell wall organization	IEP	Neighborhood
BP	GO:0071840	cellular component organization or biogenesis	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR005150	Cellulose_synth	271	837
IPR005150	Cellulose_synth	838	970

External Links

No external refs found!

GSVIVT01021798001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation