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  5. GSVIVT01024005001

GSVIVT01024005001


Description : Probable ubiquitin-conjugating enzyme E2 23 OS=Arabidopsis thaliana


Gene families : OG0000613 (Archaeplastida) Phylogenetic Tree(s): OG0000613_tree ,
OG_05_0006220 (LandPlants) Phylogenetic Tree(s): OG_05_0006220_tree ,
OG_06_0005545 (SeedPlants) Phylogenetic Tree(s): OG_06_0005545_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01024005001
Cluster HCCA: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00271430 evm_27.TU.AmTr_v1... Probable ubiquitin-conjugating enzyme E2 23... 0.05 Archaeplastida
AT1G53025 No alias Ubiquitin-conjugating enzyme family protein 0.02 Archaeplastida
AT2G16920 PFU2, UBC23 ubiquitin-conjugating enzyme 23 0.03 Archaeplastida
Cpa|evm.model.tig00000939.12 No alias Putative ubiquitin-conjugating enzyme E2 38... 0.02 Archaeplastida
Cre08.g383702 No alias Putative ubiquitin-conjugating enzyme E2 39... 0.02 Archaeplastida
Cre12.g510300 No alias Probable ubiquitin-conjugating enzyme E2 25... 0.02 Archaeplastida
Gb_29475 No alias ubiquitin-conjugating E2 protein (PHO2) 0.05 Archaeplastida
LOC_Os01g03520.1 No alias Probable ubiquitin-conjugating enzyme E2 23... 0.05 Archaeplastida
MA_248802g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_438875g0010 No alias ubiquitin-conjugating E2 protein (PHO2) 0.06 Archaeplastida
Mp7g09720.1 No alias Probable ubiquitin-conjugating enzyme E2 23... 0.03 Archaeplastida
Pp3c14_3350V3.1 No alias ubiquitin-conjugating enzyme 23 0.02 Archaeplastida
Solyc01g111680.4.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e025713_P002 No alias Probable ubiquitin-conjugating enzyme E2 23... 0.05 Archaeplastida
Zm00001e026486_P002 No alias Probable ubiquitin-conjugating enzyme E2 25... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006606 protein import into nucleus IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006613 cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008312 7S RNA binding IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
MF GO:0017056 structural constituent of nuclear pore IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
MF GO:0031369 translation initiation factor binding IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034504 protein localization to nucleus IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
BP GO:0045047 protein targeting to ER IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
CC GO:0048500 signal recognition particle IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051170 import into nucleus IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
MF GO:0061608 nuclear import signal receptor activity IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0070972 protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0140104 molecular carrier activity IEP Neighborhood
MF GO:0140142 nucleocytoplasmic carrier activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 852 996
No external refs found!