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  5. GSVIVT01024716001

GSVIVT01024716001


Description : RNA biosynthesis.transcriptional activation.PHD finger transcription factor


Gene families : OG0000311 (Archaeplastida) Phylogenetic Tree(s): OG0000311_tree ,
OG_05_0000567 (LandPlants) Phylogenetic Tree(s): OG_05_0000567_tree ,
OG_06_0004205 (SeedPlants) Phylogenetic Tree(s): OG_06_0004205_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01024716001
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01026454001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.04 Archaeplastida
Gb_21352 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c10_11240V3.1 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.02 Archaeplastida
Pp3c7_8630V3.1 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.02 Archaeplastida
Solyc08g078120.2.1 No alias PHD finger transcription factor 0.05 Archaeplastida
Zm00001e001315_P001 No alias PHD finger transcription factor 0.03 Archaeplastida
Zm00001e031101_P001 No alias PHD finger transcription factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003756 protein disulfide isomerase activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
BP GO:0006094 gluconeogenesis IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Neighborhood
BP GO:0019319 hexose biosynthetic process IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
BP GO:0046364 monosaccharide biosynthetic process IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
InterPro domains Description Start Stop
IPR032308 Jas 238 310
IPR019787 Znf_PHD-finger 353 394
No external refs found!